Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq16702 118 2e-21 >seq16702 Length=433992 Score = 118 bits (130), Expect = 2e-21 Identities = 209/305 (69%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 183014 ATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTT 183073 ||||| || ||||| | | ||| | ||| || | | || || ||||||||| | | Sbjct 196485 ATGACGACCTTTGGAACTCGGCGCAATTGCAGCTGGTCAATGAGGGCAAAATGCATGGAT 196544 Query 183074 TTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTT 183133 || | ||||||| ||||| || |||||||||||||||||| ||| || || | || | Sbjct 196545 TTCTGAGAATGTATTGGGCCAAGAAGATACTTGAATGGACAGAAACACCAGAGCAGGCGT 196604 Query 183134 TGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGAT 183193 || ||||| || | ||||| | || ||| || || || ||||| || || | Sbjct 196605 TGGAGTATAGCATATTGCTGAACGACAAATACAGTCTGGATGGCCGTGATCCCAATGGTT 196664 Query 183194 ACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTA 183253 | || || || ||||||||| | | || | || |||| || ||||| || | | | Sbjct 196665 ATGTGGGCTGCATGTGGTCTGTCGGGGGTATCCATGATAACGCATGGAAGGAGCGTGCCA 196724 Query 183254 TATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTA 183313 |||| || ||||| | |||||||| ||| | | | ||| |||||||||||| | Sbjct 196725 TATTCGGCAAGATTCGCTATATGAACTATCAAGGATGTAAACGAAAATTTGATGTTAATG 196784 Query 183314 CATTT 183318 ||||| Sbjct 196785 CATTT 196789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903113593765440