Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq24188 141 1e-28 >seq24188 Length=1289977 Score = 141 bits (156), Expect = 1e-28 Identities = 280/413 (68%), Gaps = 6/413 (1%) Strand=Plus/Minus Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 || ||||| || || || || || || | || |||| |||||| |||||||| || ||| Sbjct 950404 GGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGC 950345 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || | |||||||| ||||| | ||||||||||||||||| || ||| ||||| || Sbjct 950344 TTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAA 950285 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAG--CTCCCCG- 147099 || ||||| || |||||||| | | ||||||||| || || ||||| |||| || Sbjct 950284 GGAACCCCGAGTCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGA 950225 Query 147100 ---TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGG 147156 | | ||| || ||||| || | |||||| || ||||| ||||| ||| | Sbjct 950224 GATTGCGACACATAGAACTGCACCAAGCAGTGGCAAGGAGGCAGTGCCATTTTGGGTATA 950165 Query 147157 TCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCT 147216 ||| ||| ||||| ||||| | | | || | | ||| || | |||| Sbjct 950164 TCCAAGGGATTCCACGCCGACATAATGATACGACGATCCGAGGGATTGTTTCGAATCGTA 950105 Query 147217 TCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACG 147276 || || || | |||||| || | ||| || || | ||||| ||||| Sbjct 950104 TCAATCACTTGCTGCAGCTGATCGATGCCTTGTCCGCTGTAGTCATCATCGCAGGTGCGA 950045 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||| ||| ||||| || | ||||||||||||||| || || ||||| || || Sbjct 950044 TACTCGGCTCCAAAATGACGCCACTGGAAGCCGTAGACCGGACCCAGATCCCC 949992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583295784465600