Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq25128 187 3e-42 seq20348 118 1e-21 seq24486 104 2e-17 seq14047 93.3 4e-14 seq25099 82.4 8e-11 >seq25128 Length=30855 Score = 187 bits (206), Expect = 3e-42 Identities = 1150/1823 (63%), Gaps = 60/1823 (3%) Strand=Plus/Plus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 || ||| | || ||||| ||| || ||| ||||| || ||||||||| || | ||| Sbjct 18398 TATTTGCTAAAGATCAATGGCAAAATCGCCGAACGTCCGCAGCACATGCTGATGAGAGTG 18457 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 ||| | || || || ||||||||||| || |||| | || || ||| ||| ||| Sbjct 18458 GCGATTGGAATCCATGGCGAAGACATCGATTCCGCTGTCGAGACTTAC--AAT-CTGTTA 18514 Query 7645 TTGAAAC---AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCT 7701 | | ||| | |||||||| || ||||| || | ||||| || | ||| || || Sbjct 18515 TCGGAACGCTATTTTACGCATGCATCGCCAACGCTATTTGCTGCTGCCACCAATCGTCCC 18574 Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAA- 7760 || |||| |||||||| | ||||| ||| || |||||| ||||||| ||| Sbjct 18575 CAGATGTCATCGTGTTTCCTTCTAACAATGGTTTCCGATTCCATCGAAGGCATTTTCAAG 18634 Query 7761 CACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAA 7820 || | || | || || | || ||||||| || || || || || || || || | Sbjct 18635 TCCGTCGAGC-AGTGTGCAATGATCTCCAAATCCGCTGGTGGCATTGGACTCAATGTGCA 18693 Query 7821 CGACGTGCGCGCCAACGGTAGCCGCATC-GTGTCCACCAACGGAAAAGCCAGCGGTTTAG 7879 | || ||||| || | | ||| ||| ||| || || | | | ||||| | Sbjct 18694 TTGTATTCGTGCCAAGGGCACCTCGATCTGTG-GCACTAATGGCACTTCAAATGGTTTGG 18752 Query 7880 AGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCA---GGGGGGAAAGC 7936 ||||||| | | ||||| ||||| | || || |||| || || || || |||| Sbjct 18753 TGCCCATGCTCAGAGTGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGGCAAGC 18812 Query 7937 GCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGC-TA 7995 | |||||| |||||| || |||| || ||||| | || || | | ||| | | Sbjct 18813 GGCCAGGCGCTTTTGCCATTTACCTGGAACCTTGGCATTCCGATATCTTTG-AGTTCTTG 18871 Query 7996 AATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTG 8055 | || |||| ||| ||||| || ||| || ||||| |||| || ||| Sbjct 18872 GACCTCAAAAAGAACACGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGCCTTG 18931 Query 8056 TGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGC 8115 ||| | |||||||||||||||| ||| || | | | | | |||||||| |||| Sbjct 18932 TGGATACCCGATCTGTTTATGAAGCGTGTGGAAGCCAATGAGGATTGGTCGCTGTTGTGT 18991 Query 8116 CCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAA 8175 || | || || || || |||||| || | ||||| | |||| | | Sbjct 18992 CCTCACAAGTGTCCCGGCTTGGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATACA 19051 Query 8176 CAATACGAACACGACGG-CGCGTA---CGTGCGGCAAGTGAAAGCGCGCGACCTGCACCG 8231 | || || ||| || |||| | |||| | | ||||| | || Sbjct 19052 AAGTATGAGAGCGAGGGTCGCGCAAATCGTGTG----ATTAAAGCACAAACTCTTTGGTA 19107 Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| | |||| |||| || || || | ||||||||||| | ||||||| |||| Sbjct 19108 TGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTACATGCTCTTCAAAGACTCTTG 19167 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || |||||||| || || |||||||| |||||||| || ||| | || Sbjct 19168 CAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAATGCAGCAACCTCTGCACCGA 19227 Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411 |||||| | || || ||||| || | ||||| |||||| | || ||| | || Sbjct 19228 AATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTT 19287 Query 8412 AAACGCGTTCGTTGATCGACGCTCA---AACACTTACGACTTTGAACAATTGAAA--AAC 8466 || ||| || ||| ||| || || | ||| ||| || || ||| || Sbjct 19288 GAATATGTTTGT-----GAC-TTCAGAGAAAACATTCGA-TTTCAAGAAACTAAAGGAAG 19340 Query 8467 GCCGTGCAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTG 8526 | || || | | | ||||| | ||||||||| |||||| ||||| || Sbjct 19341 TTACTAAAACTGTCACCA-GAAATTTGAACAAAATCATTGATATCAATTACTATCCGCTG 19399 Query 8527 GAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTG 8586 || || ||| || | | || | ||| ||||| | ||||| || || | Sbjct 19400 CCCGAGGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTT 19459 Query 8587 GCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCA-TGCTCAA 8645 |||||||| || || ||||| | ||||| || || | |||| || | ||||||| Sbjct 19460 GCCGACGCCTTAATTCTGATGCGCTTTCCCTATGAGAGTGACAAAGC-CGTATTGCTCAA 19518 Query 8646 CATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCG 8705 | || ||||| | || || || || | || ||||| ||| | || || | Sbjct 19519 TCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCA 19578 Query 8706 AGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATA 8765 | | || | || ||| | ||||| || | || | ||| ||||| |||| || Sbjct 19579 AAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTA 19638 Query 8766 CGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAAT 8825 ||| |||||| | || ||||| | ||| |||||| | | | ||| |||| Sbjct 19639 CGATATGTGGGACAAGACACCCACAAACCTTTGGGATTGGACTGCTCTAAAATTGAAAA- 19697 Query 8826 TGCTCAATTCGGTTTGC----GCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGA 8881 |||| | | || | || |||||| | |||||| |||||||| || | | Sbjct 19698 ---TCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTGGCTCCAATGCCCACGGCATCTA 19754 Query 8882 CTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGA 8941 |||| || || ||||| || || || ||||||||||||| || ||| | ||| | Sbjct 19755 CTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATACTTCAAACATTTACACCA 19814 Query 8942 GACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCG 9001 | || || ||| |||| || || || | |||| ||||||| |||| || || | || Sbjct 19815 GGCGCGTTTTGTCCGGAGAGTTCAATGTGGTAAATCATCATTTGTTGCGGGATTTAACCG 19874 Query 9002 AAGCGGGCGTTTACGACGACAAAATGCGCGATGCCATC-GTGGAAGCCAACGGCAGCGTT 9060 || || | | || || | ||| || ||| || || | ||| | | Sbjct 19875 AACTGGATTTATGGGATGATGACATGAAGAATCAAATCATTGCCAGTC-GTGGCTCCATA 19933 Query 9061 CAGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAA-- 9118 || ||||| || | | ||||| | | || || || |||||||| ||||||| Sbjct 19934 CAAAACATCGAATCCATTCCTCAGGAAGTACGGGATCTTTACAAAACCGTCTGGGAAATC 19993 Query 9119 ----TGAAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAG 9174 ||||| || | ||| ||||| || ||| | || ||||||||||| ||| Sbjct 19994 TCGGTGAAGTCAACC------ATCAAGATGGCAGCTGATCGCGGTGCTTTTATTGACCAG 20047 Query 9175 AGTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCAT 9234 |||||||| || ||| | ||| |||| ||| | |||| | | | ||||||| Sbjct 20048 AGTCAATCATTCAACATTCACGTTGCCGAACCCAACTACGGCAAGTTAACATCCATTCAT 20107 Query 9235 TATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCC 9294 | || | ||||| || | || ||||| ||||| ||| |||||||||| || || Sbjct 20108 TTCTTCTCGTGGAAGGCAGGCCTCAAGACAGGAATGTATTATCTGCGCACAAAGCCAGCT 20167 Query 9295 GCTGAACCTATCAAATTTACAGT 9317 || | |||| |||| ||||| Sbjct 20168 GCCAATGCTATTCAATTCACAGT 20190 >seq20348 Length=30608 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | || || || ||||| || ||||| ||| || ||| | Sbjct 12910 AGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGC 12851 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || ||||| ||||| ||||||||||| ||||| || || || |||||| Sbjct 12850 CCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCT 12791 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | || || |||| ||| || || ||||| Sbjct 12790 TTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTG 12731 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || | ||||||||||| |||||||| Sbjct 12730 ATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 12693 >seq24486 Length=213816 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | ||| | || || ||||| || |||||||||||| | ||| | Sbjct 88362 AGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 88303 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||| ||||| || || || || || Sbjct 88302 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGAATTCCCTCC 88243 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | ||||| || | ||||| || | || Sbjct 88242 TTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACCTCCAAGGTG 88183 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || || ||||| ||||| |||||||||||| Sbjct 88182 ATGGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCATTTTG 88141 >seq14047 Length=15719 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 ||||| | || | ||| || || |||||||||||||| ||||| || || ||| || Sbjct 15688 AGTCGGAGGACCAAGTGAAGTGTCGATTCCTTTTGAATATTGTAATCTGAAAGAGTGCGA 15629 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| || || || |||||| Sbjct 15628 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCTTCT 15569 Query 134616 TTTTCTTGAATTTT 134629 || ||||| || || Sbjct 15568 TTGTCTTGGATCTT 15555 >seq25099 Length=83779 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||||| | || | ||| || || || || || |||||||| || || | Sbjct 21191 CCGCCTCGGAGTCGGAGGACCAAGTGAAGGGTCGACTCTTTCTGAATGTTATAATCAGAA 21250 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| ||||| || || || | |||||||||||| || || Sbjct 21251 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGG 21310 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || ||||| || ||||| || || Sbjct 21311 ATTCCTTCCTTATCTTGGATCTT 21333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505231909132080