Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq25128 453 2e-122 seq19105 253 3e-62 >seq25128 Length=30855 Score = 453 bits (502), Expect = 2e-122 Identities = 1192/1809 (66%), Gaps = 14/1809 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || ||||| || ||||| ||||| || || || || ||| |||| | ||||| Sbjct 20166 GCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGGCCTGCCTTCCACGAGAAGAAA 20107 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || ||||| ||| || | || ||||| | ||||| || | |||||||| Sbjct 20106 TGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACGTGAATGTTGAATGATTGACTC 20047 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 || || || ||||| || | ||| || ||||| || || | ||| | |||||| Sbjct 20046 TGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATGGTTGACTTCACCGAGATTTCC 19987 Query 68575 CAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGAAGGC--TCG-TATTTTGAATGG 68629 || | || || ||| ||| | | || | |||| | ||| | ||||| |||| Sbjct 19986 CAGACGGTTTTGTAAAGATCCCGT--ACTTCCTGAGGAATGGATTCGATGTTTTGTATGG 19929 Query 68630 ATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTA 68689 | |||| | || || ||| |||||| || ||||||| ||| || | || |||| Sbjct 19928 AGCCACGACTGGCAATGATTTGATTCTTCATGTCATCATCCCATAAATCCAGTTCGGTTA 19869 Query 68690 AAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGT 68749 || | | | | ||| |||| || | | || || || || || || | | |||| Sbjct 19868 AATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCGGACAAAACGCGCCTGGTGT 19809 Query 68750 AAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATG 68809 |||| || ||||| || || | || |||||||| |||| || || ||||| |||| Sbjct 19808 AAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATG 19749 Query 68810 CAGTTGGCATAGGTGCCACCAATAAACTA-TTTCTAAGACCATGTGTTATGATTTTATCT 68868 | || ||||| || ||||| || | | | ||||||| ||||| | ||||||| | Sbjct 19748 CCGTGGGCATTGGAGCCAC-AAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAAT 19690 Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928 |||||| ||||||||||||| | | ||| | ||| | |||||| || ||| Sbjct 19689 TTTAGAGCAGTCCAATCCCAAAGGTTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGA 19630 Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 ||||| || || | | ||| || |||||||| || || |||| || ||| || Sbjct 19629 ATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGC 19570 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 |||||||| ||||| | ||||| || || || |||||||| |||| || |||||| | Sbjct 19569 TCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAAT 19510 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 |||| ||| || | ||| | | | ||||| || || || || || |||||| Sbjct 19509 ACGGCTTTGTCACTCTCATAGGGAAAGCGCATCAGAATTAAGGCGTCGGCAAAGCCCTGA 19450 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || ||||| || || || | |||||| ||| || | | || || || | ||||| Sbjct 19449 ACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAG 19390 Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 ||||| ||||| || ||||| || | ||||| | || |||| || ||||||||| Sbjct 19389 TAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTCCTTTAGT 19330 Query 69229 TTGAGAAAATCAAATCGTCCATCTATA---ACAAACATATTCAGTGCTACAGATGCTAGA 69285 || ||||| ||| | ||| | ||||||||||||| |||| ||||| | | Sbjct 19329 TTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATTCAAGGCTATCGATGCCAAA 19270 Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 || || || || | ||||| | | ||||| | || || || || || || || Sbjct 19269 TTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCGGTGCAGAGGTTGCTG 19210 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 |||||||| || || | ||| |||||||| ||||| |||| || | ||| ||| | || Sbjct 19209 CATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCTTTGAAGAGC 19150 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT-AGC 69464 || ||||||| ||||| |||| |||||||| | ||| | | ||||| || | || Sbjct 19149 ATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAA-GAGTTTGTGC 19091 Query 69465 ATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTC 69524 || || || || || ||| | ||||| | |||||| ||| || || || Sbjct 19090 TTTAATCACACGATTTGCGCGACCCTCGCTCTCATACTTTGTATACAGCTTCTCAAAGTC 19031 Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584 ||| |||||||| || ||||| || ||||| | | ||||||| || ||||| | || Sbjct 19030 ATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTC 18971 Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644 || | | || || |||||||| |||||||| ||||| | || |||||||| | Sbjct 18970 ATTGGCTTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACG 18911 Query 69645 GGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGA 69704 | ||| | ||||| || || || || ||||| || || | ||||| | ||||| || Sbjct 18910 AGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGA 18851 Query 69705 ATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTAT 69764 |||||| ||||| || || || || | | || || || || || || ||||| | Sbjct 18850 ATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGCCGCTTGCCGCCACCTTGATCGAC 18791 Query 69765 GTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATT 69824 || | || |||||| | ||||| ||||| || | | |||||| || | ||||| Sbjct 18790 ATAACGAGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCCATT 18731 Query 69825 TGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCC 69884 || ||| | || | | || | || |||||| | | | || || || || || Sbjct 18730 AGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGAGTCCAATGCCACC 18671 Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944 || ||| ||||| | ||||| | | | | | | || || || ||| ||| Sbjct 18670 AGCGGATTTGGAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGAATC 18611 Query 69945 ATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004 | ||| | ||||| ||||| ||||| || || | | || | ||| ||| Sbjct 18610 GGAAACCATTGTTAGAAGGAAACACGATGACATCTGGGGACGATTGGTGGCAGCAGCAAA 18551 Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGC 70064 || || || ||||| || || || | ||| || | ||||||||| || || | ||| Sbjct 18550 TAGCGTTGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTCGACAGC 18491 Query 70065 TGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124 || || || || ||| ||||| ||||| || | ||||| ||| ||||| || || Sbjct 18490 GGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTGCGGACG 18431 Query 70125 TTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184 ||| | |||| ||| || || | || || || || || || || || ||||| Sbjct 18430 TTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAA 18371 Query 70185 ATAGTTGTA 70193 ||||||||| Sbjct 18370 ATAGTTGTA 18362 >seq19105 Length=237168 Score = 253 bits (280), Expect = 3e-62 Identities = 570/847 (67%), Gaps = 17/847 (2%) Strand=Plus/Plus Query 39315 TAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 39374 |||||||||| || |||||||| || |||||||| || || |||||||| |||| Sbjct 36611 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 36670 Query 39375 ATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTA 39434 | || || | |||||||| || ||||| ||| || || | || | || | Sbjct 36671 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACGCCAA 36730 Query 39435 ATTCTGAAATCAAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAAT 39491 || || |||| | ||| || ||||| || || ||| ||||| |||| | Sbjct 36731 GCTC---AACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGT 36787 Query 39492 TCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGAT-GTCTACG 39550 |||| || || | || || || || || || || || ||||| | || || ||| || Sbjct 36788 TCATGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTC-ACA 36846 Query 39551 GCCTCTGTTATTAT--CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAA 39608 || || ||||| || | ||| | | | | ||| || | |||| ||||||| | Sbjct 36847 GCATCCGTTATGATTTCAATGATGCGTTCCCG--ACTAGGCCGCTGCACCAAATGTTGGA 36904 Query 39609 ACATTAAGCAG-GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| ||||| || ||||||||||| || || ||||| | | || |||||||| || Sbjct 36905 ACAT-AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAG 36963 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 ||||| ||||||||||| || |||||||| || ||||| || |||| ||||| ||| Sbjct 36964 AATGTAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCA 37023 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 |||||||||||||| || || ||||| |||| || | || || | | | | | Sbjct 37024 CTGAAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCC 37083 Query 39788 TT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || | ||||| | ||||| || || ||| ||| ||| ||||| ||||| Sbjct 37084 TTCGAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCA 37143 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || ||||| |||||||| | | | || | ||| | | ||| || || || | || | Sbjct 37144 ATGGCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACA 37203 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || |||||||| ||||| | || || || || ||||| || || ||||| || | ||| Sbjct 37204 CTGTACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCC 37263 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 || || | || || ||| | ||| | ||| ||| |||||| || || ||||||||| Sbjct 37264 TCGGTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCA 37323 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA 40084 ||| ||||| || ||||| ||||| || |||| |||| || | || Sbjct 37324 GAAGCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTG 37383 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 ||| ||| | || || || || | ||| |||||||| | ||||| ||||| || || Sbjct 37384 GCCCAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCA 37443 Query 40145 GCCTTTT 40151 |||| || Sbjct 37444 GCCTGTT 37450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686682515068560