Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq25128 187 3e-42 >seq25128 Length=30855 Score = 187 bits (206), Expect = 3e-42 Identities = 597/913 (65%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || |||||||||| ||| | ||||| || ||||| || |||||| | || || | | | Sbjct 18911 CGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGAAGCCAAT 18970 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT---GGGT 104812 | ||||||| || || ||||| ||||| || || || || | ||| ||| Sbjct 18971 GAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGG---CTTGGAAGACGTTTGGGGG 19027 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || ||||| || || |||||||| ||| || ||||| || | | | | Sbjct 19028 GATGACTTTGAGAAGCTGTATACAAAGTATGAGAGCGAGGGTCGCGCAAATCGTGTGATT 19087 Query 104873 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | | ||| | || ||| | | |||||| |||||||| || || ||| Sbjct 19088 AAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTAC 19147 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||||| | ||||||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 19148 ATGCTCTTCAAAGACTCTTGCAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAA 19207 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 | ||| ||||| || ||||| | |||| | | | ||||||| || || || Sbjct 19208 TGCAGCAACCTCTGCACCGAAATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGC 19267 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 105112 || | ||||| || || | | || |||| | |||||| || |||| |||| Sbjct 19268 AATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAGAAAA---CATTCGATTTC 19324 Query 105113 GAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGA 105172 | ||||| | |||||||| ||||||||||||| ||| | |||| | | ||||||| Sbjct 19325 AAGAAACTAAAGGAAGTTACTAAAACTGTCACCAGAAATTTGAACAAAATCATTGATATC 19384 Query 105173 AATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230 |||| || ||| || || || ||||| ||| | ||||| ||||| ||||| Sbjct 19385 AATTACTA-TCCGCTGCCCGA-GGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCA 19442 Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 105290 | || |||||||| | || || | || ||||| ||| | | ||| ||| Sbjct 19443 TTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGCTTTCCCTATGAGAGTGACA 19502 Query 105291 AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGA 105350 |||| ||||| || || || || ||||| || | | || |||||||| | Sbjct 19503 AAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCA 19562 Query 105351 GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 105410 ||| ||| |||| | || ||||| |||||||||| | |||| ||| | | | Sbjct 19563 GTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCC-GGTGAGC 19621 Query 105411 AAGGG-GTGCTTCAATTTGATATGTGGGA-AGGTGA--GACCAAGCTTCACTACGACTGG 105466 ||||| | || || | ||||||||||| | | | || || ||| | || ||| Sbjct 19622 AAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACAAACCTT---TGGGATTGG 19678 Query 105467 GAAGCTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524 ||||| || ||| ||||| ||| | || || | ||| || || |||||| Sbjct 19679 ACTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTGGCTC 19736 Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584 ||||||| || || || || || || ||| ||||||||||||| | |||||| || || | Sbjct 19737 CAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATA 19796 Query 105585 CGACGAACATCTA 105597 | | ||||| || Sbjct 19797 CTTCAAACATTTA 19809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583068659310960