Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq24188 89.7 4e-13 >seq24188 Length=1289977 Score = 89.7 bits (98), Expect = 4e-13 Identities = 194/288 (67%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 111655 CGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGC 111714 || ||||| || || || ||||| | ||||| || | || || ||| || || Sbjct 950461 CGCTTAATGTTAAGCTTAGGAAATGAACGAGGCTGCCGCTTTAGTTGCTGTTGCAATGGT 950402 Query 111715 TGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCC 111774 | | ||||| | ||| ||||| | |||||| || |||| || || | ||||| | Sbjct 950401 TCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGCTTC 950342 Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834 || || || | || ||||||||||| ||||| || ||| || |||||||| || Sbjct 950341 AATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAAGGA 950282 Query 111835 ACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT------TATTT 111888 || || || ||||| ||| | || || || || ||||| || |||| | | Sbjct 950281 ACCCCGAGTCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGAGAT 950222 Query 111889 TGTGACACATAAAATTG-ACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || |||||||| || || || ||| | || |||||||||| |||||| Sbjct 950221 TGCGACACATAGAACTGCACCAAGCA-GTGGCAAGGAGGCAGTGCCAT 950175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391819711237702