Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq16043 86.0 2e-12 >seq16043 Length=246680 Score = 86.0 bits (94), Expect = 2e-12 Identities = 168/247 (68%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 39055 ATCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGC 39114 ||||| ||| |||| || | | ||| || || || | ||| |||||||| ||||| Sbjct 112136 ATCACCTCGTCACGCCGGTCCTGACAGAAATCAATATCAAAGTCAGGCATGGACACACGT 112077 Query 39115 TCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATC 39174 || |||||||| ||||||||||| | || | || || ||||| | || || || Sbjct 112076 TCGGGGTTCAGAAACCGCTCGAACAGCAGGTTGAAGGGAATAGGGTCAATATCCGTAATG 112017 Query 39175 CCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACG 39234 || || |||||||||| ||||| || | || || || || || || ||| | Sbjct 112016 GTCAGCGCCCACGCGGCCAGAGAGCCTGCGCCGGACCCACGGCCCGGCCCCACCGGGATA 111957 Query 39235 CCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCC 39294 | | | ||||| |||| ||| ||||| || |||| | |||||| ||||| ||| Sbjct 111956 TCATGCGCCTTCCCCCACTGGATAAAGTCCGCCACGATCATGAAGTAACCGGGGAAGCCC 111897 Query 39295 AT-CTGG 39300 || |||| Sbjct 111896 ATGCTGG 111890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159665216529228