Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq16043 91.5 5e-14 >seq16043 Length=246680 Score = 91.5 bits (100), Expect = 5e-14 Identities = 169/247 (68%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 39488 ATCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGC 39547 ||||| ||| |||| || | | ||| || || || | ||| |||||||| || || Sbjct 112136 ATCACCTCGTCACGCCGGTCCTGACAGAAATCAATATCAAAGTCAGGCATGGACACACGT 112077 Query 39548 TCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATC 39607 || |||||||| ||||||||||| | || | || || ||||| | || || || Sbjct 112076 TCGGGGTTCAGAAACCGCTCGAACAGCAGGTTGAAGGGAATAGGGTCAATATCCGTAATG 112017 Query 39608 CCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACA 39667 || || |||||||||| ||||| || | || ||||| || || || ||| | | Sbjct 112016 GTCAGCGCCCACGCGGCCAGAGAGCCTGCGCCGGACCCACGGCCCGGCCCCACCGGGATA 111957 Query 39668 CCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCC 39727 | | | ||||| |||| ||| ||||| || |||| | |||||| ||||| ||| Sbjct 111956 TCATGCGCCTTCCCCCACTGGATAAAGTCCGCCACGATCATGAAGTAACCGGGGAAGCCC 111897 Query 39728 AT-CTGG 39733 || |||| Sbjct 111896 ATGCTGG 111890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160189852291100