Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq24188 118 9e-22 >seq24188 Length=1289977 Score = 118 bits (130), Expect = 9e-22 Identities = 223/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 |||||||||| | ||||||||| |||||| ||| | | || ||| || | || Sbjct 950501 AAAATCTTCATAACGAAAGTCTTCAATATTTGTGACCTGCCGCTTAATGTTAAGCTTAGG 950442 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 ||| | |||||| || | ||||| ||| || ||| || | ||||| | ||| || Sbjct 950441 AAATGAACGAGGCTGCCGCTTTAGTTGCTGTTGCAATGGTTCCACATGATTAAGATACAC 950382 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553 ||||| ||| || || || || | || |||||||| | | || |||| || ||||| Sbjct 950381 ATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGCTTCAATCCGGTCACATGGGCAAT 950322 Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613 |||||| || | || || ||| | ||||||||||| || || ||||||||||| Sbjct 950321 CATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAAGGAACCCCGAGTCCCATGTCTGC 950262 Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCC----GTTTGC--AACATAAAACTGACT 118667 || |||||||| || || ||||| || || | |||| ||||| ||||| Sbjct 950261 ACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGAGATTGCGACACATAGAACTGCAC 950202 Query 118668 TATGATGTGACATGGAGGCAGAACCAT 118694 | | ||| || |||||||| |||| Sbjct 950201 CAAGCAGTGGCAAGGAGGCAGTGCCAT 950175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414343674455656