Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq20348 89.7 4e-13 >seq20348 Length=30608 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || || ||||| || || || || || || |||| |||||| || Sbjct 12693 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAA----CC 12748 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | || ||| |||| |||||| || || ||||||||||| |||| | Sbjct 12749 GTCGGA-TACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAG 12807 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || || || || || |||||||| || |||||||| || | |||| | ||||||| Sbjct 12808 ATCAACAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATT 12867 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||| |||||||||||| || ||||| ||||| Sbjct 12868 ACAATATCCAAAAAGAGTCTACATTGCACTTGGT 12901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355748100778158