Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq25128 495 5e-135 seq19105 293 3e-74 >seq25128 Length=30855 Score = 495 bits (548), Expect = 5e-135 Identities = 1220/1835 (66%), Gaps = 24/1835 (1%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| | | || ||||| ||||| || ||||| ||||| || || || || Sbjct 20187 GTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTTGAGG 20128 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || |||| | ||||||| ||| ||||| ||| || | || ||||| | Sbjct 20127 CCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGCAACG 20068 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | || ||||| || || || ||||| || | |||||| ||||| || || Sbjct 20067 TGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTTGATG 20008 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA-- 75614 | | ||| | |||||||| | |||||| ||| | | || | |||| Sbjct 20007 GTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAGGAATG 19948 Query 75615 GATTTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 |||| | | ||||| ||||| || | | | || ||| |||||| || ||||||| | Sbjct 19947 GATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCATCATCC 19888 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 || || | ||||||||| | | | | |||| |||| || | | || ||||| Sbjct 19887 CATAAATCCAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACTCTCCG 19828 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 ||||| || | | |||||||| || ||||| || || | || ||||| || ||| Sbjct 19827 GACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCC 19768 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 75852 | || || ||||| || || || ||||| || ||||| || | | | ||||| | || Sbjct 19767 ATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCCAC-AAGCAGCGAGTTTCTAACGCC 19709 Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 ||| | ||||||| ||||||| ||||||||||||| | || ||| || Sbjct 19708 ATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCCCAAAGGTTTGTGGGTGTCTTGTC 19649 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 ||| | |||||| || |||||||| ||||| | | ||| || ||||| || | Sbjct 19648 CCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGG 19589 Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032 |||||||||| ||| || || ||||| ||||| | ||||| || || || |||||||| Sbjct 19588 ACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAA 19529 Query 76033 AATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAA 76092 |||| || ||| || | |||| ||| ||| | ||| | | | ||||| || Sbjct 19528 GATCTGCTGATTGAGCAATACGGCTTTGTCACTCTCATAGGGAAAGCGCATCAGAATTAA 19469 Query 76093 TGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC 76152 || || || | |||||||| ||||| ||||| || | |||||| |||||| | | Sbjct 19468 GGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTT 19409 Query 76153 AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTAC 76212 || || || | || || ||||| ||||| || ||||| || | ||||||| || Sbjct 19408 TGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGT 19349 Query 76213 TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT---ATCACAAACATATT 76269 |||| || ||||||||||| ||||| ||| || ||| ||||||||||||| Sbjct 19348 TTTAGTAACTTCCTTTAGTTTCTTGAAATCGAATGTTTTCTCTGAAGTCACAAACATATT 19289 Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329 | ||||| ||||| | ||| || ||||| | ||||| | | ||||| | || Sbjct 19288 CAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAAT 19229 Query 76330 CTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTT 76389 || ||||| || || || || ||||| || |||| ||| || || |||||||| |||| Sbjct 19228 TTCGGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTT 19169 Query 76390 ACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGA 76449 || ||||| || | || | ||||||| ||||| |||| || ||||| | ||| | Sbjct 19168 GCAAGAGTCTTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGC 19109 Query 76450 TTTCCAGACGACTCT-AGCTTTTATTATA-GATTTGTATCGCTTCTCTCTTTCATATTGT 76507 | ||| | || | | ||||| || | | |||||| || ||| || ||||| | | Sbjct 19108 ATACCA-AAGAGTTTGTGCTTTAATCACACGATTTG-CGCGACCCTCGCTCTCATACTTT 19051 Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 ||||| | | ||||| ||||| |||||||| || ||||| || ||||| | | ||| Sbjct 19050 GTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGA 18991 Query 76568 CACATCAATGACCACTCACCAT---CTTCCTTAACCCGTTTCATAAAGAGATCAGGTATC 76624 |||| || ||||| || ||| ||||| || || |||||||| ||||| |||||| Sbjct 18990 CACAACAGCGACCAATCCTCATTGGCTTCC---ACACGCTTCATAAACAGATCGGGTATC 18934 Query 76625 CATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGA 76684 || | || || ||||| || | ||| | ||||| || || || |||||||| || Sbjct 18933 CACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTTGCCCGTGTTCTTTTTGAGG 18874 Query 76685 TCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGT 76744 || | |||||| | ||||| |||||||| ||||| || || || || | | | || || Sbjct 18873 TCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTAAATGGCAAAAGCGCCTGGC 18814 Query 76745 CGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGA 76804 || || || || ||||| | ||| | || |||||| | ||||| | ||| || Sbjct 18813 CGCTTGCCGCCACCTTGATCGACATAACGAGCCACATTATTAAACACTCTGAGCATGGGC 18754 Query 76805 ATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTA 76864 | | || || || || ||||| || ||| | || | | || ||||||||| | Sbjct 18753 ACCAAACCATTTGAAGTGCCATTAGTGCCACAGATCGAGGTGCCCTTGGCACGAATACAA 18694 Query 76865 CTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTG 76924 | | || || || || || || ||| ||||| | ||||| | | | | Sbjct 18693 TGCACATTGAGTCCAATGCCACCAGCGGATTTGGAGATCATTGCACACTGCTCGACGGAC 18634 Query 76925 TCATAGATGCCCTCTATACTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATT 76981 | | ||||| || || ||| | |||| |||| ||||| ||||| ||||| Sbjct 18633 TTGAAAATGCCTTCGATGGAATCGGAAACCAT--TGTT-AGAAGGAAACACGATGACATC 18577 Query 76982 TGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCA 77041 || || || || | ||| ||| | || || |||||||| || || | ||| Sbjct 18576 TGGGGACGATTGGTGGCAGCAGCAAATAGCGTTGGCGATGCATGCGTAAAATAGCGTTCC 18517 Query 77042 GAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCG 77101 || | |||||||| || || | | | | || || || ||| ||||| | || Sbjct 18516 GATAACAGATTGTAAGTCTCGACAGCGGAATCGATGTCTTCGCCATGGATTCCAATCGCC 18457 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 || | ||||| ||| ||||| || ||||| | | || ||| || || | ||| || Sbjct 18456 ACTCTCATCAGCATGTGCTGCGGACGTTCGGCGATTTTGCCATTGATCTTTAGCAAATAC 18397 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 || || | || || || |||||||||||||| Sbjct 18396 GAACGCTCGAGGGTCTTGAAGCCAAAATAGTTGTA 18362 >seq19105 Length=237168 Score = 293 bits (324), Expect = 3e-74 Identities = 574/839 (68%), Gaps = 11/839 (1%) Strand=Plus/Plus Query 46328 TAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCA 46387 |||||||||| || |||||||| || |||||||| || || |||||||| |||| Sbjct 36611 TAACTCCCATGCGCTGATATTCACCCACTTTCTTCTCGAAGAAGTTGGTTTTGCCATCCA 36670 Query 46388 ATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTA 46447 | || || | ||||| || || ||||| | || ||||| || | || | Sbjct 36671 AAGAGATCATCTCCATGAACGAGAATGGATTCTTTGTGTTGTAAATCTTGCCCACGCCAA 36730 Query 46448 ATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCA 46507 || | || | ||| || || || || ||||| ||||| |||| |||| Sbjct 36731 GCTCAACCAATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCA 36790 Query 46508 TTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCAT 46567 | || || | ||||| || || || || || || ||||| || |||||||| ||||||| Sbjct 36791 TGCCAATCAAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCAT 36850 Query 46568 CCGATATTAT--CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 ||| ||| || | ||| | | |||| ||| || | |||| |||||||| ||||| Sbjct 36851 CCGTTATGATTTCAATGATGCG--TTCCCGACTAGGCCGCTGCACCAAATGTTGGAACAT 36908 Query 46626 TAAACAT-GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATG 46684 || || ||||| |||||||| || |||||||| | | || |||||||| || |||| Sbjct 36909 -AAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATG 36967 Query 46685 TGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAA 46743 | || |||||||| ||||||||||| || ||||| || || | || |||| | ||| Sbjct 36968 TAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGC-AAAGCTCCCACTG 37026 Query 46744 AAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT- 46802 ||||| |||||||| ||||| || || || | || | || || | ||||| | || Sbjct 37027 AAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTC 37086 Query 46803 -ATGA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATA 46860 | || ||||| ||||||| || ||||| ||| ||| ||||| ||||| || Sbjct 37087 GAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATG 37146 Query 46861 GCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTA 46920 ||||| |||||| ||| | | || | ||| | | ||| || || || | | ||| Sbjct 37147 GCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTG 37206 Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||| ||||| | || || || || ||||| || || ||||| || | ||| || Sbjct 37207 TACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCG 37266 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040 || | ||| || ||| | ||| ||||| || ||| || || || ||||||||| | Sbjct 37267 GTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAA 37326 Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTC 47100 |||||||| || ||||| ||||| || |||| |||| || || || | Sbjct 37327 GCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCC 37386 Query 47101 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || ||| | || || || || | ||| |||||||| | |||||||| || || || || Sbjct 37387 CAATCAGTCATGTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAACGATGCTTCAGC 37445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712699541585280