Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq19105 188 7e-43 >seq19105 Length=237168 Score = 188 bits (208), Expect = 7e-43 Identities = 461/696 (66%), Gaps = 2/696 (0%) Strand=Plus/Plus Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 || || | ||| || ||||| || ||||||| |||||| | || |||| || || || Sbjct 36739 AATAGGCGATCAGCGACAAACTCGATATATTCGGACATCAGAGCACAGTTCATGCCAATC 36798 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 | || || || | |||||| | ||| | ||||| | |||||||| | || Sbjct 36799 AAGTTGACGGGCAGCGCATCGGTGAGGAACTCCTGCTCAATAGTCACAGCATCCGTTATG 36858 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACAT-GC 23513 |||| || || ||| |||||| | | |||| | |||| ||| || || Sbjct 36859 ATTTCAATGATGCGTTCCCGACTAGGCCGCTGCACCAAATGTTGGAACA-TAAGCACCGC 36917 Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573 ||| |||||||| || |||||||| | | |||||||| || || ||||| | ||| || Sbjct 36918 AAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCGTTGGAGAATGTAAGTCCAGG 36977 Query 23574 CATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACC 23633 ||| | ||| || || || | ||| || || | ||||| || ||||| || || Sbjct 36978 CATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAGCTCCCACTGAAGAAGATGCC 37037 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 |||||||| ||||| || | || |||| |||||| | ||| | ||| ||||| Sbjct 37038 TTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTGGCAGCCTTCGAAGAGATCCA 37097 Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753 | ||| | |||||| || ||| | || |||||||| || || ||||| Sbjct 37098 AGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATCGTTTCAATGGCATTGAAGAG 37157 Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 | | | | | | ||| | ||||| || ||||| || | ||| |||||||| || Sbjct 37158 ATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATGAGCACACTGTACATTTCGGA 37217 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAAC 23873 ||| | ||| || || |||||||| || |||||||| || | || || | || || || Sbjct 37218 ATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCGGTCACCTGCAC 37277 Query 23874 ATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAA 23933 || | ||| | || | | ||||||||||||||| |||||| |||||||||||| Sbjct 37278 TTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATTCCATCAGAAGCAGCAAAGAA 37337 Query 23934 AGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAAT 23993 || | |||| ||| ||||| | |||| | | | || ||||||| | || Sbjct 37338 GGCCAACACATGCGATATGAAATGACGCTCATTATCCGTAAGCTTGGCCCAATCAGTCAT 37397 Query 23994 ATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || || || | ||| ||||| || || ||||| || Sbjct 37398 GTCCTTGGACAGATCCACTTCTTCGACGGTCCAGAA 37433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521316208815600