Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5758 91.5 3e-13 >seq5758 Length=62776 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 61254 TTCAATCACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCG 61313 |||||||| |||||||| | ||| | | |||||||| |||||||||||| | Sbjct 7436 TTCAATCATGAGAGTCCACGGCGTGGTGAGAATTTTGTGACACGTAAAATTACGCGTTCT 7495 Query 61314 GTTGCAAATATTTTTAACGGTGTCGAA--AAATGCATGTATCTAGGAAACATAGACTCTA 61371 || ||||| || || | || || ||| | | | || || || | ||||| | Sbjct 7496 GTGGCAAAGATATT--GCTCAATCAAATGGAATACTTTGAGCTGGGTAATCTGGACTCGA 7553 Query 61372 AAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAG 61431 || | || ||||| |||| || ||| | ||||| |||||| ||||| |||| | | Sbjct 7554 AACGTGACTGGGGTCATGCCAGCGACTATGTGGAGGCCATGTGGATGATGCTGCAGCGCG 7613 Query 61432 ATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTGAATTCGT 61489 || | |||| || | ||| ||||| |||||| ||||| ||||| |||||||| || Sbjct 7614 ATGCGCCAGCCGATTTCGTAATTGCCACTGGAGAGACGCACAGTGTGCGTGAATTTGT 7671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057712008503690