Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6467 143 3e-29 >seq6467 Length=13775 Score = 143 bits (158), Expect = 3e-29 Identities = 216/306 (71%), Gaps = 6/306 (2%) Strand=Plus/Plus Query 145640 TGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGT 145699 ||||| ||||||||||| |||||| | | | ||| ||| ||| || || | |||| Sbjct 8771 TGAGCTTGGGAAAGGGCTTGGGGCTACGTTTTATCTGCTGCTCCAGCGGTTCTATATGGT 8830 Query 145700 TGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGA 145759 |||| || ||||| || || || | | ||||||||| || ||||||| || ||||| | Sbjct 8831 TGAGATAAACGTGAGCATCGCCTATGGTGTGGATGAATTCGCCGGGCTTCAGACCCGTCA 8890 Query 145760 GGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCC 145819 ||||| | | ||||| ||||| | |||| ||| ||||||||||| || || || | Sbjct 8891 CATGGGCTATTAAATAGGTGAGCAGAGCGTAGGAGGCAATGTTGAAGGGAACGCCGAGGC 8950 Query 145820 CCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC----GCC--CGCCACGT 145873 ||||||| | |||||| || ||||||||||| | || || | | || || Sbjct 8951 CCATGTCAGCACTGCGCTGATATAGCTGGCAGGACAATTCGCCCTTGGACTGCGAGACAA 9010 Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCC 145933 ||||||| ||| ||||| ||||| || ||||| ||| | ||| ||| |||| Sbjct 9011 AGAACTGAACTAGGCAATGGCACGGCGGTAGCGCCATTTTGGGTATATCCATCGGATTCC 9070 Query 145934 AGGCGG 145939 |||||| Sbjct 9071 AGGCGG 9076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590015852442520