Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6467 105 5e-18 >seq6467 Length=13775 Score = 105 bits (116), Expect = 5e-18 Identities = 221/325 (68%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 |||||||| || || | ||||| || ||||| ||||| || || ||||| ||||| Sbjct 8990 GAATTGTCCTGCCAGCTATATCAGCGCAGTGCTGACATGGGCCTCGGCGTTCCCTTCAAC 8931 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 ||||| || || ||||| || ||| | || || ||||| || | | | || | || Sbjct 8930 ATTGCCTCCTACGCTCTGCTCACCTATTTAATAGCCCATGTGACGGGTCTGAAGCCCGGC 8871 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 || || ||||||||||||| || || || |||| || || ||||||||||| | | Sbjct 8870 GAATTCATCCACACCATAGGCGATGCTCACGTTTATCTCAACCATATAGAACCGCTGGAG 8811 Query 20632 TTACAGTTAACACG-ACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAA 20690 ||| ||| ||| | |||| | ||||||| || ||||| || |||| Sbjct 8810 CAGCAGATAAAACGTAGCCCCAAGCCCTTTCCCAA-GCTCAACATTAAGCGCCAGGTTAC 8752 Query 20691 AGATATTAACGATTTTAAAGCT--GATGATTTTGTGTTAGAAGGTTATAATCCCCATAAT 20748 | ||||| | || ||| ||| || ||| ||| | | || || |||||| |||| Sbjct 8751 AAATATTGAGGACTTT--CGCTACGAAGATCTTGAACTCGTGGGCTACAATCCCGATAAG 8694 Query 20749 TCAATTCCAATGGAAATGTCTGTTT 20773 | ||||||||||| ||| | |||| Sbjct 8693 ACGATTCCAATGGAGATGGCCGTTT 8669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399143800050535