Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5580 86.0 6e-12 >seq5580 Length=51276 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| | || || || | ||||| | || | ||| | Sbjct 19336 ATGCAAATTTTTGTAAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 19395 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||||||| | || ||| ||||| ||||||||||| || ||||| ||||| Sbjct 19396 GATACCATCGAGAATGTTAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAG 19455 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | |||| || ||||| || || ||||||| | | | | | ||||| || Sbjct 19456 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTTTCTGACTACAAT 19515 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| || ||| | ||| |||| || Sbjct 19516 ATCCAGAAAGAGTCCACTTTGCATTTGGTGCT 19547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478612960157360