Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6717 109 1e-18 >seq6717 Length=26621 Score = 109 bits (120), Expect = 1e-18 Identities = 292/444 (66%), Gaps = 2/444 (0%) Strand=Plus/Plus Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 || ||||| || ||||| ||||||||||||| ||||| ||||| ||| || | ||| Sbjct 549 GAACGTTCCATACCCAGTCTGGTGGATGGCCTTAAGCCCGGTCAGCGCAAGGTCATGTTT 608 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 | |||||||| ||| | || | || || || || || || |||| || Sbjct 609 ACGTGCTTCAAGCGTAACGATAAGCGTGAGGTAAAAGTGGCCCAATTGTCGGGTTCGGTG 668 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATG 218742 | ||||| || | ||| |||||||| ||| | |||||| ||||||| || Sbjct 669 GCTGAAATGTCAGCCTATCATCACGGCGAGATGTCCCTGCAGATGACCATTGTGAATTTG 728 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 |||||| | | ||||||| ||||| || || ||| || || ||||||||| ||| Sbjct 729 GCACAGAATTTTGTGGGCTCAAACAATATCAATTTGTTGGAGCCGCGCGGTCAGTTCGGT 788 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 | ||||| ||||| |||||| ||| || | ||||| || ||| | ||||| Sbjct 789 ACACGTCTCACTGGTGGCAAGGATTCTGCGAGCGCTCGTTATATTTTCACATTGATGTCG 848 Query 218863 CCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGAC 218922 || | || || | | | ||| | |||||| || || |||||| | ||| Sbjct 849 CCGCTAACACGTCTCATCTATCATCCGTTGGATGATCCCCTGCTGCAGTATCAGGTGGAT 908 Query 218923 GATGGTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAA 218981 ||||| || || |||||||| |||||| | || ||| || | | || || || Sbjct 909 GATGG-TCAGCGCATTGAGCCAATTTGGTATATTCCCATTATACCCATGGTACTGGTGAA 967 Query 218982 TGGTGCCAATGGTATCGGGACAGG 219005 ||| ||| | || ||||| || || Sbjct 968 TGGCGCCGAGGGCATCGGCACTGG 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027727983239183