Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6717 131 2e-25 >seq6717 Length=26621 Score = 131 bits (144), Expect = 2e-25 Identities = 292/428 (68%), Gaps = 14/428 (3%) Strand=Plus/Minus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| ||||| || || |||| ||| ||||| || ||||| || | | || ||||| Sbjct 993 AACCAGTGCCGATGCCCTCGGCGCCATTCACCAGTACCATGGGTATAATGGGAATATACC 934 Query 171786 AGTCTGGTTCAATCGCAC-GCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTC 171844 | ||| ||||| || | | |||||||| || ||| | |||| ||| || ||| | Sbjct 933 AAATTGGCTCAAT-GCGCTGACCATCATCCACCTGATACTGCAGCAGGGGATCATCCAAC 875 Query 171845 GGATCAAAGATTTTACGAGCATCCTTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 171900 |||| | |||| ||| | | || || | |||||| || || | || | | Sbjct 874 GGATGATAGATGAGACGTGTTAGC--GGCGACATCAATGTGAAAATATAACGAGCGCTCG 817 Query 171901 -AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGAT 171959 ||| ||| |||||||| ||||||| || || || ||||| | ||| || | | || Sbjct 816 CAGA---ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAAT 760 Query 171960 TGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAG 172018 ||||||||||||| |||| | | | ||||| || ||||| || ||| || ||||| Sbjct 759 TGATATTGTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGAC 701 Query 172019 ACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTC 172078 | || |||||||| ||||| ||| | || || || | ||| ||| || ||||| || Sbjct 700 ATCTCGCCGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTT 641 Query 172079 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 172138 | |||| ||| ||| | |||||||| | |||||||||| | ||| ||||| Sbjct 640 ACCTCACGCTTATCGTTACGCTTGAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTA 581 Query 172139 AGGCCGTC 172146 ||||| || Sbjct 580 AGGCCATC 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597291900840040