Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6717 150 2e-31 >seq6717 Length=26621 Score = 150 bits (166), Expect = 2e-31 Identities = 311/450 (69%), Gaps = 16/450 (4%) Strand=Plus/Minus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| ||||| || || |||| ||| ||||| || ||||| || | | || ||||| Sbjct 993 AACCAGTGCCGATGCCCTCGGCGCCATTCACCAGTACCATGGGTATAATGGGAATATACC 934 Query 175806 AGTCTGGTTCAATCGCAC-GCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTC 175864 | ||| ||||| || | | |||||||| || ||| | |||| ||| |||||| | Sbjct 933 AAATTGGCTCAAT-GCGCTGACCATCATCCACCTGATACTGCAGCAGGGGATCATCCAAC 875 Query 175865 GGATCAAAGATTTTACGAGCATCCTTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 175920 |||| | |||| ||| | | || || | |||||| || || | || | | Sbjct 874 GGATGATAGATGAGACGTGTTAGC--GGCGACATCAATGTGAAAATATAACGAGCGCTCG 817 Query 175921 -AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGAT 175979 ||| ||| |||||||| ||||||| || || || ||||| | ||||| | | || Sbjct 816 CAGA---ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAAT 760 Query 175980 TGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAG 176038 |||||||||||||||||| | | | | ||||| || ||||| || ||| || ||||| Sbjct 759 TGATATTGTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGAC 701 Query 176039 ACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTC 176098 | || |||||||| ||||| ||| | || ||||| | ||| ||| || ||||| || Sbjct 700 ATCTCGCCGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTT 641 Query 176099 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 176158 | |||| ||| ||| | |||||||| | |||||||||| | ||| ||||| Sbjct 640 ACCTCACGCTTATCGTTACGCTTGAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTA 581 Query 176159 AGGCCGTCGGCCATGTGTGCG-ATGGAACG 176187 ||||| || ||| | || | |||||||| Sbjct 580 AGGCCATCCACCA-GACTGGGTATGGAACG 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613443832375080