Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5758 86.0 8e-12 >seq5758 Length=62776 Score = 86.0 bits (94), Expect = 8e-12 Identities = 175/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 22570 AATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCA 22629 || ||||| || | |||| |||||||| |||||||||||| | ||||| || || Sbjct 7391 AACTATAGGGAGGCCTACGACATGTTTGCCTGCAATGGTATACTCTTCAATCATGAGAGT 7450 Query 22630 CCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGT 22689 || | || ||||| || || |||||||| ||||| || | ||| || || || | | Sbjct 7451 CCACGGCGTGGTGAGAATTTTGTGACACGTAAAATTACGCGTTCTGTGGCAAAGAT-ATT 7509 Query 22690 GCAGGTAAACAAA---AATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGT 22746 || || |||| ||| || | || ||||| || || ||||||| || |||||| Sbjct 7510 GC--TCAATCAAATGGAATACTTTGAGCTGGGTAATCTGGACTCGAAACGTGACTGGGGT 7567 Query 22747 CATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGAT 22806 ||||| |||| || ||| | ||||||| || | || | ||| || | ||| Sbjct 7568 CATGCCAGCGACTATGTGGAGGCCATGTGGATGATGCTGCAGCGCGATGCGCCAGCCGAT 7627 Query 22807 TTTGTTATTGCAACAGG 22823 || || ||||| || || Sbjct 7628 TTCGTAATTGCCACTGG 7644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635067198720920