Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6717 84.2 3e-11 >seq6717 Length=26621 Score = 84.2 bits (92), Expect = 3e-11 Identities = 167/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 |||||||||||| |||| |||||||| || ||||| | ||||| | | |||||| || Sbjct 812 ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAATTGATATT 753 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTCGC 167656 || || ||| | ||| | ||||| || || || || || || ||||| | |||| Sbjct 752 GTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGACATCTCGC 694 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCA- 167715 |||| || || || | |||||||||| | | | ||| || || || || | |||| Sbjct 693 CGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTTACCTCAC 634 Query 167716 TCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCA 167775 ||| | | | || ||| || | | |||| |||||||| ||| || || || ||| Sbjct 633 GCTTATCGTTACGCTT-GAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTAAGGCCA 575 Query 167776 TC 167777 || Sbjct 574 TC 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588915166141400