Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6716 87.8 2e-12 >seq6716 Length=15056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 236/355 (66%), Gaps = 11/355 (3%) Strand=Plus/Minus Query 169184 ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCG 169243 |||||| || || |||||||| | ||| ||| ||||| ||||||| ||||| || Sbjct 14206 ACCCTTAATATGGGAACCATCCTGATCCTGATCAGTCATGATCATAACTTTGCCATATCG 14147 Query 169244 AAG----TTCAGAAACATCT-TGGT-AGTCTTTTC--CTTGT--TGAAGACCCAAGATCT 169293 | || ||| |||| |||| || |||| ||||| || || || | |||| Sbjct 14146 CAACGTCTTTAGAT-CATCCATGGTGAGATATTTCTTCTTGTACTGCAGTCCAATAATCT 14088 Query 169294 TCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACAT 169353 | |||| |||| ||| || ||||||||| | | || ||||| |||| Sbjct 14087 TGCACAGATTATTGATCTCAGCATTCTCCGTGAGCTGTTTAAAGGTGGCTTCGCGCACAT 14028 Query 169354 TCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGAC 169413 | ||| || || || |||||||| ||||||| | ||||| | |||| || | Sbjct 14027 TGAGCAGCTTGCCGCGCAGCGGAAAGACCCCATAGTAGTTGCGTCCGATGACGCCCAGGC 13968 Query 169414 CCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAG 169473 | | ||| || | || ||| ||||| || ||||| |||| ||||||||||||| || | Sbjct 13967 CGGAGACAGCCAAGGATTTGGCTGAGTCTCCCTCGGTGAGAATGAGGGTACACATTATGG 13908 Query 169474 ATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528 | | || || |||| || || || |||| |||||| || || | ||||| Sbjct 13907 AATTTTTGGTGCCTGCCTCATTGGCATCTTCCAGCTTGGGTATGCCTTTGATTTT 13853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589919862358120