Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq5580 100 2e-15 >seq5580 Length=51276 Score = 100 bits (110), Expect = 2e-15 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATG--AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| || ||||| || | ||| ||||| ||| | | | || | || || |||| || Sbjct 19557 ACGCAGGCGGAGCACCAAATGCAAAGTGGACTCTTTCTGGATA--TTGTAGTCAGAAAGG 19500 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | |||||| || ||||| ||||| ||||| | ||| || ||||| ||||||||| Sbjct 19499 GTGCGACCATCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATT 19440 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 ||||| ||||| || ||||| ||| ||| || || ||||| | || ||| Sbjct 19439 CCTTCTTTGTCCTGGATCTTGGCTTTAACATTCTCGATGGTATCCGACGGTTCGACCTCA 19380 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| ||||| || || || |||||||| Sbjct 19379 AGAGTGATGGTCTTACCCGTGAGGGTTTTTACAAAAATTTG 19339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267824759837924