Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq5758 91.5 2e-13 >seq5758 Length=62776 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/303 (67%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| |||||||||||||| || || || ||||||| ||||| |||| Sbjct 7305 CACCATAAGGCGAACGTGGATAGAATGGCGTCTGTTCGTTCTGTGGCGTCTCCACAACCT 7246 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCA 48193 | ||||| || || || || || || |||| |||| | ||||| || || Sbjct 7245 TGCCATACAGCTCGGACGTCGAGGCCTGGTAGAATTTAACCGATTTCTCCATGCCA--CA 7188 Query 48194 AA--CGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTC 48251 | || | || || || | | ||| ||||||| ||||| || | || || || Sbjct 7187 AGTGCGTATGGCGTCCAGAATGCGCAGCGTGCCTACTGCATCAACCTCTGCCGTGTATTC 7128 Query 48252 GGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGG 48311 | || ||||| |||||||| ||||| ||||| | |||||||||||||| ||| Sbjct 7127 GCTCAGATCAAATGAAACCTTCACATGCGATTGTGCAGCCAGATTATAAATCTCCGTTGG 7068 Query 48312 TTGAACCTGCTGAATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATGCAA 48371 | |||| | ||| | | |||| | | | ||| || | ||| ||||||||||| Sbjct 7067 CTTAACCATGTTAATGATCTTCACCAGGCTGCTGCTGTCCGTCATGTCGCCATAATGCAA 7008 Query 48372 TTT 48374 ||| Sbjct 7007 TTT 7005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665425662747160