Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq248 120 9e-22 >seq248 Length=20779 Score = 120 bits (132), Expect = 9e-22 Identities = 186/262 (71%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||||| |||||||||||| || || ||| | ||| || || || ||| Sbjct 7309 TCCATAGCCTTGATTAGACGACGCTGAATGTAGCCGGTTTCGGCTGTCTTGACGGCCGTA 7368 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCC 302692 || || ||||| ||||||| ||||| |||||||| | | ||| || ||| |||| Sbjct 7369 TCGATGAGACCCTCACGACCGCCCATGGCATGGAAATAGAACTC-GGAGGGCGTCAAGCC 7427 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAA 302752 || | | ||||| |||| || || || | | |||||| || ||| |||| | | Sbjct 7428 AGCC-AGATAGGAGTTCTCCACAAAGCCCCTGGACTCGGGACCATAATCGTCCTTGATGA 7486 Query 302753 AGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCT 302812 | || ||||| || | ||| |||| || || |||||||| || || |||||||||| Sbjct 7487 AATGCGGCAGAGTGCGCTTCCTGAAGCCATACGGTATACGCTTACCCTCCACGTTCTGCT 7546 Query 302813 GTCCCAGGCACGAAATCATCTG 302834 | |||| || | ||| | ||| Sbjct 7547 GGCCCACACAAGCAATAACCTG 7568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471661779130631