Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6467 122 1e-22 >seq6467 Length=13775 Score = 122 bits (134), Expect = 1e-22 Identities = 214/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930 ||| ||||||||||| ||||| |||| | | | ||| | ||| || || | Sbjct 8766 AATGTTGAGCTTGGGAAAGGGCTTGGGGCTACGTTTTATCTGCTGCTCCAGCGGTTCTAT 8825 Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 |||||||| || ||||| || || || | |||||| | || || || ||||| || || Sbjct 8826 ATGGTTGAGATAAACGTGAGCATCGCCTATGGTGTGGATGAATTCGCCGGGCTTCAGACC 8885 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 ||||| ||||| | | ||||||||||| | |||| ||| ||||||||||| || || Sbjct 8886 CGTCACATGGGCTATTAAATAGGTGAGCAGAGCGTAGGAGGCAATGTTGAAGGGAACGCC 8945 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC----- 147105 ||||||||||| | | ||| || |||||||| || | || || | || | Sbjct 8946 GAGGCCCATGTCAGCACTGCGCTGATATAGCTGGCAGGACAATTCGCCCTTGGACTGCGA 9005 Query 147106 -ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 || | ||||| ||| ||||||||||| |||||||| ||| | ||| || Sbjct 9006 GACAAAGAACTGAACTAGGCAATGGCACGGCGGTAGCGCCATTTTGGGTATATCCATCGG 9065 Query 147165 GTTCCAGGCCGA 147176 |||||||| || Sbjct 9066 ATTCCAGGCGGA 9077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583427732983200