Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6717 122 1e-22 >seq6717 Length=26621 Score = 122 bits (134), Expect = 1e-22 Identities = 290/428 (68%), Gaps = 14/428 (3%) Strand=Plus/Minus Query 178883 AACCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 178942 |||| ||||||||||| |||| || ||||| || ||||| || | | || ||||| Sbjct 993 AACCAGTGCCGATGCCCTCGGCGCCATTCACCAGTACCATGGGTATAATGGGAATATACC 934 Query 178943 AGTCTGGTTCAATCGCAC-GCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTC 179001 | ||| ||||| || | | || ||||| || ||| | |||| ||| || ||| | Sbjct 933 AAATTGGCTCAAT-GCGCTGACCATCATCCACCTGATACTGCAGCAGGGGATCATCCAAC 875 Query 179002 GGATCAAAGATTTTACGAGCATCCCTGGTGAGTTT--TGTGAAGATGTACCT--CGTTTG 179057 |||| | |||| ||| | | || || | |||||| || || | || | | Sbjct 874 GGATGATAGATGAGACGTGTTAGC--GGCGACATCAATGTGAAAATATAACGAGCGCTCG 817 Query 179058 -AGACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGAT 179116 ||| ||| |||||||| ||||||| || || || ||||| | ||||| | | || Sbjct 816 CAGA---ATCCTTGCCACCAGTGAGACGTGTACCGAACTGACCGCGCGGCTCCAACAAAT 760 Query 179117 TGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAG 179175 ||||||||||||| |||| | | | ||||| || ||||| || ||| || ||||| Sbjct 759 TGATATTGTTTGAGCCCACAAAATTCTGTGCCAAATTCACAATGGTCATCTGC-AGGGAC 701 Query 179176 ACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTC 179235 | || |||||||| || || ||| | || ||||| | ||| ||| || ||||| || Sbjct 700 ATCTCGCCGTGATGATAGGCTGACATTTCAGCCACCGAACCCGACAATTGGGCCACTTTT 641 Query 179236 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTG 179295 | |||| ||| ||| | |||||||| | |||| ||||| | || ||||| Sbjct 640 ACCTCACGCTTATCGTTACGCTTGAAGCACGTAAACATGACCTTGCGCTGACCGGGCTTA 581 Query 179296 AGGCCGTC 179303 ||||| || Sbjct 580 AGGCCATC 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618371323374280