Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20americana_20[genbank_20GCA_5F001245395.1_202015-10-02] 8,263 sequences; 58,684,694 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq6467 100 2e-16 >seq6467 Length=13775 Score = 100 bits (110), Expect = 2e-16 Identities = 168/237 (71%), Gaps = 12/237 (5%) Strand=Plus/Plus Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCC 29706 ||||||||| | |||| || || ||||||||||| || | |||||||| || || || Sbjct 8814 CAGCGGTTCTATATGGTTGAGATAAACGTGAGCATCGCCTATGGTGTGGATGAATTCGCC 8873 Query 29707 CGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 29766 || | || || || || || || || | || ||||| |||| |||| ||| ||||| Sbjct 8874 GGGCTTCAGACCCGTCACATGGGCTATTAAATAGGTGAGCAGAGCGTAGGAGGCAATGTT 8933 Query 29767 AAAGGGCACCCCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCT 29824 ||||| || ||||| |||||||| | ||| | ||| || |||||||| || | || Sbjct 8934 GAAGGGAACGCCGAGGCCCATGTCAGCACTG--CGCTGATATAGCTGGCAGGACAATTCG 8991 Query 29825 CCGTCG--CT----CACGTAAAACTGACACATGGC-ATGGCACGGAGGAAGGGCCAT 29874 || | | || || | |||||| || ||| ||||||||| || || ||||| Sbjct 8992 CCCTTGGACTGCGAGACAAAGAACTGA-ACTAGGCAATGGCACGGCGGTAGCGCCAT 9047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406122297208018