Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq13747 152 5e-32
>seq13747
Length=19884421
Score = 152 bits (168), Expect = 5e-32
Identities = 454/687 (66%), Gaps = 14/687 (2%)
Strand=Plus/Plus
Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753
||||| || ||||| || || || || || || || |||||||||||| ||||| ||
Sbjct 8706166 TTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGGTTT 8706225
Query 16754 GTAGCTGAAAATATTTTAGAGTAC-CCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812
| | | ||||| | ||| ||||| || | | || | ||||| ||||||||
Sbjct 8706226 TTGGTGTTGTAGATTTT-GCCTACGCCCAGCTCTACCAGTAGCCGGTCCGCCACAAATTC 8706284
Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872
|| ||||| |||| || ||||||||||| || || | | || || | || || ||
Sbjct 8706285 GATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATTCACGGGCAAGGCGTCGGT 8706344
Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACT-CGTTCCTCG- 16930
| || ||||| || | || || || ||||| || | | || ||||
Sbjct 8706345 GAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAAT-CTCGATGATGCG---CTCGC 8706400
Query 16931 GACGGTGTATGTTTAAGATGT--TTAAACATCAG-ACATGCGAAATCGCAATGTAATCCC 16987
|||| || | | | || || | ||||| || ||| ||||| ||||| || | ||
Sbjct 8706401 GACGTGGTTTCTGGACGAGGTGCTGGAACATAAGCACA-GCGAAGTCGCAGTGCAGACCT 8706459
Query 16988 TCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTT 17047
||||| ||| |||||| ||||| || || |||| ||||||||| ||||| |||||
Sbjct 8706460 TCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATCAAACCTCGCTTCTTC 8706519
Query 17048 AACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCG 17107
||||| || || | ||| || || |||||||||||||| |||| ||||| |||
Sbjct 8706520 AACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCCACGGCAGCAAATGCG 8706579
Query 17108 ATTAATCGTTCGGCGTACGTCGC-GTCTTTGTTACGAATCCATTTCTGCACCCACTCGGC 17166
|| | || || | | | || | ||| | | |||||| | | |||| || ||
Sbjct 8706580 ATGATGCGCTCCCCAAAGTTGGCTGACTTCG-AAGAAATCCAGGCCAGAGCCCAATCTGC 8706638
Query 17167 TTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAG 17226
|| |||| | | |||||| || ||||| || || | | || | || |
Sbjct 8706639 CTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAACAGGTATTCACGCTGGTGGGG 8706698
Query 17227 GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGC 17286
|| || || ||||||||||| | |||||||| || ||||| | ||| ||||||||
Sbjct 8706699 ATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCAGAGTGCACGTTTTCCATGGC 8706758
Query 17287 TATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC 17346
|| || || ||||| || || || || |||| | ||||| ||| ||| || ||
Sbjct 8706759 GATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGAACCTCCTGACTGAAGCGCTC 8706818
Query 17347 CGCTAGATTTTCGTTCACGATGCCGTC 17373
| | || || |||||||| || || ||
Sbjct 8706819 CACCAGGTTCTCGTTCACAATTCCATC 8706845
Score = 100 bits (110), Expect = 3e-16
Identities = 178/256 (70%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842
||||| || |||||||| || || | | ||||||||||| | |||| |||| ||
Sbjct 16052313 TTCATGTAGCGTATCTTCCCAAAGATAGATCGTTCCTTCCAGCCCATGTCATGGACTCCT 16052254
Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902
| | | ||| | || ||||||||||| ||||| || ||| || | ||| |||
Sbjct 16052253 CCGATAGACCACATACACCCCACGTATCCATTGGGGTCTCGTCCGTCCAGGCTGTACTTA 16052194
Query 119903 TCGTTTAAGTAGATA--CAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTA 119960
|| || ||||||| | || || | || || |||||||| ||||||| || |
Sbjct 16052193 TCATT-AAGTAGAATGGCGTACTCT-AGGGCCTGCTCGGGAGTCTCTGTCCATTCGAGGA 16052136
Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020
| || |||||||||||||| || | | | || ||||| || || ||||| |||| ||| |
Sbjct 16052135 TCTTCTTAGCCCAGTACATGCGCAGGAAGCCGTGCATCTTGCCCTCACGTACCAGTTGCA 16052076
Query 120021 GTTGTGCGGCGTTCCA 120036
||| || | |||||
Sbjct 16052075 ATTGGGCCGAATTCCA 16052060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517456653319320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |