Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq13747 152 5e-32 >seq13747 Length=19884421 Score = 152 bits (168), Expect = 5e-32 Identities = 454/687 (66%), Gaps = 14/687 (2%) Strand=Plus/Plus Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753 ||||| || ||||| || || || || || || || |||||||||||| ||||| || Sbjct 8706166 TTTTCAAAGAAGTTGGTCTTCCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGGTTT 8706225 Query 16754 GTAGCTGAAAATATTTTAGAGTAC-CCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812 | | | ||||| | ||| ||||| || | | || | ||||| |||||||| Sbjct 8706226 TTGGTGTTGTAGATTTT-GCCTACGCCCAGCTCTACCAGTAGCCGGTCCGCCACAAATTC 8706284 Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872 || ||||| |||| || ||||||||||| || || | | || || | || || || Sbjct 8706285 GATGTATTGCGACATCAAGTCGCAGTTCATGCCGATCAAATTCACGGGCAAGGCGTCGGT 8706344 Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACT-CGTTCCTCG- 16930 | || ||||| || | || || || ||||| || | | || |||| Sbjct 8706345 GAGGAACTCCTGCTCAATGTCCACAGCATCGCGGATAAT-CTCGATGATGCG---CTCGC 8706400 Query 16931 GACGGTGTATGTTTAAGATGT--TTAAACATCAG-ACATGCGAAATCGCAATGTAATCCC 16987 |||| || | | | || || | ||||| || ||| ||||| ||||| || | || Sbjct 8706401 GACGTGGTTTCTGGACGAGGTGCTGGAACATAAGCACA-GCGAAGTCGCAGTGCAGACCT 8706459 Query 16988 TCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTT 17047 ||||| ||| |||||| ||||| || || |||| ||||||||| ||||| ||||| Sbjct 8706460 TCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCGGGCATCAAACCTCGCTTCTTC 8706519 Query 17048 AACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCG 17107 ||||| || || | ||| || || |||||||||||||| |||| ||||| ||| Sbjct 8706520 AACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATACCCTCCACGGCAGCAAATGCG 8706579 Query 17108 ATTAATCGTTCGGCGTACGTCGC-GTCTTTGTTACGAATCCATTTCTGCACCCACTCGGC 17166 || | || || | | | || | ||| | | |||||| | | |||| || || Sbjct 8706580 ATGATGCGCTCCCCAAAGTTGGCTGACTTCG-AAGAAATCCAGGCCAGAGCCCAATCTGC 8706638 Query 17167 TTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAG 17226 || |||| | | |||||| || ||||| || || | | || | || | Sbjct 8706639 CTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAACAGGTATTCACGCTGGTGGGG 8706698 Query 17227 GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGC 17286 || || || ||||||||||| | |||||||| || ||||| | ||| |||||||| Sbjct 8706699 ATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCAGAGTGCACGTTTTCCATGGC 8706758 Query 17287 TATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC 17346 || || || ||||| || || || || |||| | ||||| ||| ||| || || Sbjct 8706759 GATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGAACCTCCTGACTGAAGCGCTC 8706818 Query 17347 CGCTAGATTTTCGTTCACGATGCCGTC 17373 | | || || |||||||| || || || Sbjct 8706819 CACCAGGTTCTCGTTCACAATTCCATC 8706845 Score = 100 bits (110), Expect = 3e-16 Identities = 178/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTGTCGTGGAGCCCC 119842 ||||| || |||||||| || || | | ||||||||||| | |||| |||| || Sbjct 16052313 TTCATGTAGCGTATCTTCCCAAAGATAGATCGTTCCTTCCAGCCCATGTCATGGACTCCT 16052254 Query 119843 GCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTA 119902 | | | ||| | || ||||||||||| ||||| || ||| || | ||| ||| Sbjct 16052253 CCGATAGACCACATACACCCCACGTATCCATTGGGGTCTCGTCCGTCCAGGCTGTACTTA 16052194 Query 119903 TCGTTTAAGTAGATA--CAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTA 119960 || || ||||||| | || || | || || |||||||| ||||||| || | Sbjct 16052193 TCATT-AAGTAGAATGGCGTACTCT-AGGGCCTGCTCGGGAGTCTCTGTCCATTCGAGGA 16052136 Query 119961 tttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAA 120020 | || |||||||||||||| || | | | || ||||| || || ||||| |||| ||| | Sbjct 16052135 TCTTCTTAGCCCAGTACATGCGCAGGAAGCCGTGCATCTTGCCCTCACGTACCAGTTGCA 16052076 Query 120021 GTTGTGCGGCGTTCCA 120036 ||| || | ||||| Sbjct 16052075 ATTGGGCCGAATTCCA 16052060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517456653319320