Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq13747 156 4e-33
>seq13747
Length=19884421
Score = 156 bits (172), Expect = 4e-33
Identities = 539/827 (65%), Gaps = 28/827 (3%)
Strand=Plus/Plus
Query 15898 AGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTC 15957
||| || ||||| | ||||| || | || ||||| |||||||| || || || ||
Sbjct 8706132 AGCCACGCCCATACGCTGGTACTCTCCCACCTTCTTTTCAAAGAAGTTGGTCTTCCCGTC 8706191
Query 15958 TAAAGATATATTTTCCATAAAATC-AAAGGGATTA-GTAGCTGAAAATATCTTAGAGTAC 16015
| || || | ||||| |||| |||||| || | | || | || || | |||
Sbjct 8706192 CAGCGAGATCATCTCCATGAAATTGAAAGGGTTTTTGGTGTTGTAGAT---TTTGCCTAC 8706248
Query 16016 -CCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCA 16074
||||| || | || | || || |||||||| || ||||| |||| ||||||||
Sbjct 8706249 GCCCAGCTCTACCAGTAGCCGGTCCGCCACAAATTCGATGTATTGCGACATCAAGTCGCA 8706308
Query 16075 ATTAATTCCTAT--AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACA 16132
|| || || || || || || || | || | || | || | || || || |
Sbjct 8706309 GTTCATGCCGATCAAATTC--ACGGGCAAGGCGTCGGTGAGGAACTCCTGCTCAATGTCC 8706366
Query 16133 ACCGCTTCTTTAATGATATCGGTG----GCTCGTGTTTCAGACGGTGTATGGTTTAGGTG 16188
|| || || || || ||| || ||||| | | ||| | ||| |||||
Sbjct 8706367 ACAGCATCGCGGATAATCTCGATGATGCGCTCGCG----ACGTGGTTTCTGGACGAGGTG 8706422
Query 16189 TTTAAACATTAGACAC-GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGT 16247
| ||||| || ||| ||||||||||| || || |||||||| ||| |||||| ||||
Sbjct 8706423 CTGGAACATAAG-CACAGCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGT 8706481
Query 16248 TGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA-- 16305
|||| || || | || ||||| ||||| ||||| |||||||| || | |||||
Sbjct 8706482 TGGAGAAGGTCAGACCGGGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGC 8706541
Query 16306 TGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT 16365
|| | | | |||||||||||||| || | ||||| ||||| | || ||| | | |
Sbjct 8706542 TGCCGCTG--AAGAATATACCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTT 8706599
Query 16366 AGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCAT 16425
|| || | |||||| | | |||| || || || | || | | |||
Sbjct 8706600 GGCTGACTTCGAAGAAATCCAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCAT 8706659
Query 16426 CGTTTCTATGGCCTTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCA 16483
||| || ||||| || |||| ||| | | | || |||| || || |||||
Sbjct 8706660 CGTCTCAATGGCATTGAACAGGTATTCACGCTGGTGGGGATCTCGA--ATGTAAGTATCG 8706717
Query 16484 ATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAG 16543
|| || | ||||||||| || ||||| | ||| || ||||| || || || || |||||
Sbjct 8706718 ATGAGCACACTGTACATCTCAGAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAA 8706777
Query 16544 CATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACG 16603
|| || ||||||| | || || ||| || || ||| |||||||||| |||||
Sbjct 8706778 CAGCGCGCCTCCGTGACCTGAACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACA 8706837
Query 16604 ATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGAT 16663
|| || || |||||||| || |||| | ||| ||||| | ||||||
Sbjct 8706838 ATTCCATCCGAAGCAGCAAAGAAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCC 8706897
Query 16664 GTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTC 16710
|||| ||||||||| | | ||| || || | ||||| || ||
Sbjct 8706898 TTAAGGCGATGCCAATCGGTGAGATCCTTCGAGAGGTCCACCTCCTC 8706944
Score = 114 bits (126), Expect = 1e-20
Identities = 163/226 (72%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCCT 118995
|||||||| |||||||| ||||| | | || |||||||| | |||| |||| ||||
Sbjct 16052313 TTCATGTAGCGTATCTTCCCAAAGATAGATCGTTCCTTCCAGCCCATGTCATGGACTCCT 16052254
Query 118996 GCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTA 119055
| | | ||| | ||| ||||||||||| ||||| ||| |||||| | |||||||
Sbjct 16052253 CCGATAGACCACATACACCCCACGTATCCATTGGGGTCTCGTCCGTCCAGGCTGTACTTA 16052194
Query 119056 TCGTTTAAGTAGA--TACAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113
|| ||||||||| | || | || || || ||||||| ||||||| || |
Sbjct 16052193 TC-ATTAAGTAGAATGGCGTACTC-TAGGGCCTGCTCGGGAGTCTCTGTCCATTCGAGGA 16052136
Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTC 119159
| || |||||||||||||| || | | |||||||| || |||||
Sbjct 16052135 TCTTCTTAGCCCAGTACATGCGCAGGAAGCCGTGCATCTTGCCCTC 16052090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511326507042680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |