Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq13746 455 4e-123 seq13747 127 2e-24 >seq13746 Length=16180835 Score = 455 bits (504), Expect = 4e-123 Identities = 1258/1909 (66%), Gaps = 32/1909 (2%) Strand=Plus/Plus Query 52798 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 52857 |||||| | || || ||||| | || || || || || || | ||||||||||| Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCC 14158295 Query 52858 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGG 52917 ||||| ||||| |||| ||| ||||| || ||| || || ||| | || Sbjct 14158296 GGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGG 14158355 Query 52918 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 52977 ||||| | ||||||||| | || || || ||||| || || || || | || || || Sbjct 14158356 CTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGC 14158415 Query 52978 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 53036 |||||| ||| | | || || |||||||| | ||||| |||| |||| || | Sbjct 14158416 CATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACCT 14158474 Query 53037 CTTCTGGAA-GGTTTG--TATTCTGAATAGATCCACCATCTACC-ATAATCCTATTCTTG 53092 || |||| || || |||| ||||||||||| || || || ||| |||||| Sbjct 14158475 TTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTTC 14158533 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || ||||| | ||| || | ||| || || | || || | ||| | ||||| ||| Sbjct 14158534 ATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACT 14158593 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || || || || || | ||| | | || |||||||| | || || || || | ||| Sbjct 14158594 TGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGAC 14158653 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 || || || |||| ||| |||||||| ||||| || ||||| || || ||||||| Sbjct 14158654 TCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAG 14158713 Query 53273 TTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 53331 ||||| | || | |||| |||| || || |||| || ||| | ||| ||| | | Sbjct 14158714 TTTCTGACTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGT 14158772 Query 53332 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 53391 ||| || ||||| || ||||| | |||| |||| Sbjct 14158773 CGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATA 14158832 Query 53392 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 53451 || || || | ||| || || | || ||||| ||||| ||||| | || || | || Sbjct 14158833 AGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTA 14158892 Query 53452 AATGGTTTCGAAGATCTTCTTATTTA-GATCTTGTGCTTCCAGGCTATCAAATGGATAAT 53510 || ||||| || |||| | || | || | ||| ||| ||| || | |||||| Sbjct 14158893 GATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGTAGGGATAAC 14158951 Query 53511 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 53570 | ||||| | |||||| || | ||| |||||||| || |||||||| | ||| ||| Sbjct 14158952 GCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCA 14159011 Query 53571 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630 |||| || | | || || || | |||||| | || |||||||| || |||||||||| Sbjct 14159012 TATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGT 14159071 Query 53631 TTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTA-- 53687 ||||| | | ||||| || ||||| || || || ||| || ||| ||| Sbjct 14159072 TTCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATAT-GTCT-TCTCGG 14159128 Query 53688 ---TTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 53744 | ||||||||||| | || || || |||| ||| ||||| || | ||| | || Sbjct 14159129 GAGTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTG 14159188 Query 53745 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 53804 | ||| | | || || ||||| ||||| || ||||| ||||| || | ||| |||| Sbjct 14159189 AAGAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTT 14159248 Query 53805 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCT 53864 | || |||||| ||| || || ||||| | || ||| | || | ||||| || | | Sbjct 14159249 GGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTT 14159308 Query 53865 GGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA-GATTTGTATCTCTTT 53923 | || || || || || ||| | | | || || | | |||| | || | Sbjct 14159309 GCGACTCAATGATAGCAAACCACAAGGACTGTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368 Query 53924 TCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 || || ||||| ||| | | ||||||||| || ||||| |||| | | ||| Sbjct 14159369 CCTGTT-CGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCA 14159427 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 || |||| || |||||||| |||||||| || | | ||| |||||||||||| ||| Sbjct 14159428 GGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAG 14159487 Query 54044 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 54102 ||||| || ||||| || || ||| || | ||| | || || ||| || || || || || Sbjct 14159488 AGATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGT 14159546 Query 54103 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGT 54162 |||||| ||||| || || ||| | | | ||| |||||||| || |||| || |||| Sbjct 14159547 ATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGC 14159606 Query 54163 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 54222 | |||| ||||| ||| || |||||||| | || | || ||| ||| | || Sbjct 14159607 AAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGAC 14159666 Query 54223 TCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACT 54282 ||||| ||| |||| | |||||||||| ||||| || ||| | || || | || | Sbjct 14159667 TCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTT 14159726 Query 54283 GGCACGAATATTACTAATTGA----TAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 |||||||| ||| || ||||| || || || || || ||||| | | Sbjct 14159727 TGCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGG 14159782 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 ||||| | | | || | |||| ||||| || || | ||||| | || || | Sbjct 14159783 CGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGA 14159842 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 ||||| |||| ||| ||||| | || | || ||| | || || |||||||| | Sbjct 14159843 AACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAG 14159902 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGAT 54518 | || | || || || | ||||||||||| | || | || || || | || Sbjct 14159903 TGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCAT 14159962 Query 54519 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 54578 ||||||| | ||| || ||||| | |||||| || || | || ||| || |||| Sbjct 14159963 GAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTTA 14160022 Query 54579 TTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 54638 |||| || | ||| || |||| ||||||||| ||||| || || || |||||| | Sbjct 14160023 TTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCAC 14160082 Query 54639 GTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTAC 54687 | || ||||| ||| |||||| || |||| || ||| || || || Sbjct 14160083 GATCATAAATTATAGATGAGTTAAGGCGATCCGCATTTTTTTTGACCAC 14160131 >seq13747 Length=19884421 Score = 127 bits (140), Expect = 2e-24 Identities = 350/534 (66%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 24138 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 24197 ||||| |||||||| ||||| ||||| || || | |||||||| || || || ||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 24198 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 24257 ||||| | || ||||| || | ||| || || || ||||| || ||||| || Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATA 8706558 Query 24258 CCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG--CTGTCATGTA-TC 24314 || || || || ||||| || || | | || ||| | ||| || | | | || Sbjct 8706559 CCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATC 8706618 Query 24315 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 24374 || |||||||||| ||||| || || |||||| ||||| || ||||| || Sbjct 8706619 CAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAAC 8706678 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 || || | | | |||| || || ||||| || | | ||| ||||| || Sbjct 8706679 AGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCA 8706738 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 || || | |||||| ||||| ||||| || ||||||||||| | ||||| || | ||| Sbjct 8706739 GAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGA 8706798 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 || || || || || || | | || || ||||| ||||| || || ||||| Sbjct 8706799 ACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAG 8706858 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 24614 || |||| || || || || | |||||| | || || |||||| || Sbjct 8706859 AAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCGGTG 8706918 Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 24668 | ||| || || | ||||| || || || ||||| || || || || |||||| Sbjct 8706919 AGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593619561521520