Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq13746 152 6e-32 >seq13746 Length=16180835 Score = 152 bits (168), Expect = 6e-32 Identities = 461/708 (65%), Gaps = 22/708 (3%) Strand=Plus/Plus Query 145589 CAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGG 145648 |||||||||| | || || || ||||||| |||| | | | || || ||| Sbjct 795523 CAAAGTCCTCGTAGCGAAAATCTTCAATGTCCTGCACCTGGCGCTTAATAACTAGTTTGG 795582 Query 145649 GAAAGGGCCGGGGGCTCCTGGTCA-GCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAG 145707 | |||||||| || ||| | ||| | || || || ||||||||||| || ||||| Sbjct 795583 GGAAGGGCCGCGG-CTCGCGTTCAAGTTGCTCCTGAAGTGGCTCCACGTGATTTAGGTAT 795641 Query 145708 ACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCG 145767 || |||| ||| |||| ||| | |||||| || |||| || || |||| |||||| Sbjct 795642 ACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCAGGCTTTAGACCAGTGACATGGGCG 795701 Query 145768 ACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCC 145827 | ||| ||||||| || || ||| ||| ||||||||||| || ||||| |||||||| Sbjct 795702 ATCATATAGGTCAACAAGGCATAGGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTCG 795761 Query 145828 CCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC------ACGTAGAACTGG 145881 | || || ||||||||||||||||| || |||| | || || || ||||| Sbjct 795762 GCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCGCGCTCCTGAGAGACATAAAACTGA 795821 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941 || | |||||| || |||| ||||| || | |||| || ||||| || | Sbjct 795822 GCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGAATGTCCAGAGGATTCCACGCCGAC 795881 Query 145942 AGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGG 146001 | || || || || | || ||| |||| ||| | || | | | | || || Sbjct 795882 ATGATGATCCGTCTATCCGAAGGATTCTTCTTTATCGTGTCAATGACATGCTTTAGTTGA 795941 Query 146002 TCCACGCCCTGCCCCCGGTAATC----TGTCTTGGAGTCCACGTACGCGGCCCCGAAGTG 146057 || | |||| || ||||| || | | | ||| || |||| || ||||| Sbjct 795942 TCGATACCCTTTCCACGGTAGTCATCGTCACAGGTAGT----ATATTCGGCGCCAAAGTG 795997 Query 146058 CCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGC 146117 || ||| ||||| ||||| || || |||| ||| || | | || | | ||| Sbjct 795998 CCGCCATTGGAAACCGTACACCGGGCCCAAGTCTCCAACGGCACGGTCCGTATGTCCGAG 796057 Query 146118 CCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC---GGA 146174 | | | ||||| |||| || | ||| |||||||||| | ||| | | || | Sbjct 796058 CTTGTCTAGGAACTCCCTGGTGCTGTTTCCGTCCCAGATGTGAACGTTCTTGGCCTGCAA 796117 Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234 ||| || | |||||| || | ||||| |||| ||||||| || ||| Sbjct 796118 AAGC---TTAGCGTCCGTCTTGCCGGCCACAAACCAAAGCAACTCTTCGGCTACTGCCCG 796174 Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGA 146282 ||||||| | |||||||||| || ||| || ||||| || ||| Sbjct 796175 GAAGAAGACACGTTTGGTGGTCAACAAGGGAAAACAGCCCCTCAAGGA 796222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975387925960