Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_001669.1 Length=5243 Score E Sequences producing significant alignments: (Bits) Value seq8593 275 2e-70 seq8 273 7e-70 >seq8593 Length=1850 Score = 275 bits (304), Expect = 2e-70 Identities = 154/155 (99%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 2575 CACAACTAGAATGCAGTGaaaaaaaTGCTTTATTTGTGAAATTTGTGATGCTATTGCTTT 2634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTT 60 Query 2635 ATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTAT 2694 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 ATTTGTAACCATTATAAGCTGCAATAAACAAGTTAGCAACAACAATTGCATTCATTTTAT 120 Query 2695 GTTTCAGGTTCAGGGGGAGGTGTGGGAGGTTTTTT 2729 ||||||||||||||||||||||||||||||||||| Sbjct 121 GTTTCAGGTTCAGGGGGAGGTGTGGGAGGTTTTTT 155 >seq8 Length=287 Score = 273 bits (302), Expect = 7e-70 Identities = 164/170 (96%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 2561 GAGTTTGGACAAACCACAACTAGAATGCAGTGaaaaaaaTGCTTTATTTGTGAAATTTGT 2620 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 GAGGTTGGACAT-CCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT 229 Query 2621 GATGCTATTGCTTTATTTGTAACCA-TTATAAGCTGCAATAAACAAGTTAACAACAACAA 2679 ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| Sbjct 228 GATGCTATTGCTTTATTTGTAACCAATTATAAGCTGCAATACACCAGTTAACAACAACAA 169 Query 2680 TTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGGTGTGGGAGGTTTTTT 2729 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 168 TTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGGTGTGGGAGGTTTTTT 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16663093832280