Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq13747 107 4e-18 >seq13747 Length=19884421 Score = 107 bits (118), Expect = 4e-18 Identities = 187/264 (71%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508 || ||||| || | ||| |||| |||| | || || || ||||| | || | || Sbjct 16052057 CTGTGGAATTCGGCCCAATTGCAACTGGTACGTGAGGGCAAGATGCACGGCTTCCTGCGC 16052116 Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGA-ACACCTGAAGACGCTTT-GAGTT 189566 ||||| |||||||||||||| || |||||||| ||| || || || | || | |||| Sbjct 16052117 ATGTACTGGGCTAAGAAGATCCTCGAATGGAC-AGAGACTCCCGAGCAGGCCCTAGAGTA 16052175 Query 189567 ATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTA 189625 |||| || || | |||||| || ||||| ||| || || || |||||||| Sbjct 16052176 CGCCATTCTACTT-AATGATAAGTACAGCCTGGACGG-ACGAGACCCCAATGGATACGTG 16052233 Query 189626 GGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTT 189685 || |||||||||||||| | ||| | || || | | ||||| ||| || | || ||| Sbjct 16052234 GGGTGTATGTGGTCTATCGGAGGAGTCCATGACATGGGCTGGAAGGAACGATCTATCTTT 16052293 Query 189686 GGAAAGATAAGATATATGAATTAT 189709 || |||||| | || ||||||||| Sbjct 16052294 GGGAAGATACGCTACATGAATTAT 16052317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923038137089960