Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq13746 123 2e-23 >seq13746 Length=16180835 Score = 123 bits (136), Expect = 2e-23 Identities = 274/406 (67%), Gaps = 10/406 (2%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| || ||||| || || |||||| | || ||||| || |||||| | || Sbjct 796033 GGAGACTTGGGCCCGGTGTACGGTTTCCAATGGCGGCACTTTGGCGCCGAATATACT-AC 795975 Query 20278 ATGA-ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 || || | || |||| | || | |||||| || | |||| ||| | || Sbjct 795974 CTGTGACGATGACTACCGTGGAAAGGGTATCGATCAACTAAAGCATGTCATTGACACGAT 795915 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 || | ||| || || ||| | || || | | || ||||| || || | || Sbjct 795914 AAAGAAGAATCCTTCGGATAGACGGATCATCATGTCGGCGTGGAATCCTCTGGACATTCC 795855 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAAT---- 20451 |||||| |||||||| || || |||| || || ||||| || || | | Sbjct 795854 AAAAATGGCATTGCCTCCGTGCCAC-TGCTTGGCTCAGTTTTATGTCTCTCAGGAGCGCG 795796 Query 20452 --GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCA 20509 ||| | || || || ||||||||||| ||| || ||||| |||||||| || |||| Sbjct 795795 GCGAACTCTCCTGCCAGCTGTATCAACGAAGCGCCGACATGGGCCTGGGTGTACCCTTCA 795736 Query 20510 ATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGG 20569 | ||||| ||||| || | || |||||||| || ||||| || | | |||| | | Sbjct 795735 ACATTGCCTCCTATGCCTTGTTGACCTATATGATCGCCCATGTCACTGGTCTAAAGCCTG 795676 Query 20570 GTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCA 20615 ||||||| || ||||| || |||||| ||||| | ||||| ||||| Sbjct 795675 GTGACTTCGTACACACTATGGGAGACACGCATGTATACCTAAATCA 795630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399117110358805