Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq13744 104 5e-17
>seq13744
Length=5790199
Score = 104 bits (114), Expect = 5e-17
Identities = 196/283 (69%), Gaps = 9/283 (3%)
Strand=Plus/Plus
Query 254106 CTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACT 254165
|| || |||||||| || || || || || | | || || ||| ||| |||||||||
Sbjct 563277 CTGGAACTGAACGCCTCGGATGAGCGAGGCATCAATGTGGTGCGCACCAAAATCAAGACT 563336
Query 254166 TTCTCCAAGAT-GTCGATTTC---GT-CGTTCCAAC--CCGGC--TGTCCGCCTTTCAAG 254216
|||||| || | | || | || || || || | ||| ||||| || ||||||
Sbjct 563337 TTCTCCCAGCTTGCCGCCAGCAGTGTGCGCCCCGACGGCAGGCCGTGTCCACCGTTCAAG 563396
Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276
|||| |||||||||||||| ||| ||||||| | ||| ||||| || || || ||
Sbjct 563397 ATCGTCATCCTGGACGAGGCCGACTCCATGACACATGCCGCCCAGTCGGCGCTGCGTCGC 563456
Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336
|| ||||||| | | | || || || |||||| | |||||||| || || |
Sbjct 563457 ACCATGGAGAAGGAGAGCCAAAGCACTCGGTTCTGCCTGATTTGCAACTATGTCTCCCGG 563516
Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||||| ||| | | || ||||| ||||||| || ||||
Sbjct 563517 ATCATCGTGCCGATCACGTCGCGGTGTTCCAAGTTCCGGTTCA 563559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073577246317632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |