Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 185 8e-42
>seq13746
Length=16180835
Score = 185 bits (204), Expect = 8e-42
Identities = 940/1475 (64%), Gaps = 30/1475 (2%)
Strand=Plus/Plus
Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882
||||| | || || |||||||| ||||| || || | |||| ||| ||||| ||
Sbjct 14158273 TTTGTGCGCAAGTAGTACATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATG 14158332
Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATATTGTCATTGATTGACTTTGAT 36940
|| || ||| | || | || | | | || |||||| | || || || ||||
Sbjct 14158333 GATGTGAGCTTTCCATAGTTTGGCTCTGCCACATGGATATTG--AAGGACTGGCTCTGAT 14158390
Query 36941 CTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAA 37000
||||||||||||| | || || ||||||| | | |||| || || ||||| |
Sbjct 14158391 CTATAAACGCACCGCGATCAGCGGCCATTTTAATGGTTGATTTCACTGAGATTTCCCATA 14158450
Query 37001 CCGTTTTATATATTTGTTTTATATTATCTGGTA---AATCTAAATGTTGAATAGAACCAT 37057
| ||||| || | | | || | || | | || | || ||||||||| ||
Sbjct 14158451 CTGTTTTGTAAAGGTCGCGAACCTTTTGGGGAATGGATTCAATATTTTGAATAGATCCCC 14158510
Query 37058 TATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATT-AGTTCT 37116
| | | || |||||| ||||||| | ||||| || | || | | ||
Sbjct 14158511 TGCTGGAGATTATCTGATTCTTCATGTCATCGTCCCACAAATC-CAGCTCCGTCAAGTCC 14158569
Query 37117 CTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATA 37176
|||| | || | || || || || || || || || | ||| | ||| ||||| |||
Sbjct 14158570 CTCAGCAAATGATGGTTAACCACTTGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATA 14158629
Query 37177 TTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTA 37236
|| | || || || || | |||||| || |||| | || |||| || ||||| ||
Sbjct 14158630 TTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTG 14158689
Query 37237 GGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG-TGTATTAATTCTCTTTTTTAG 37295
||||| || || | | ||| ||||| | |||||| ||| || || || || ||
Sbjct 14158690 GGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTGT-TTGATAGACTCCTTCAG 14158748
Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACC 37355
||||| ||||| | | | || || | || |||||| || || || ||||| ||
Sbjct 14158749 AGATTTCCAGTCCCAGAGACCAGTCGGCGTTTTATCCCACATGTCGTACTGCAGAATTCC 14158808
Query 37356 TTTACTCGCTGGAGAATCGTT-ATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414
||||| |||| | || || ||| || ||||||| ||||| ||| || |||||||
Sbjct 14158809 CTTACTTACTGG-GCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGC 14158867
Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474
|||| | || || || || | || |||||||| ||||| ||| || || | |||
Sbjct 14158868 AACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTG 14158927
Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534
| || ||||| ||| | | ||| | || | || | | | ||||||| ||||||||||
Sbjct 14158928 CCTCCTCGCTTTCGTAGGGATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACAC 14158987
Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGA--TCTAGACGATTCTATCACTGGATAATA 37592
|||| || || || | ||| || |||| || ||| | | || || |||||| |
Sbjct 14158988 CGATTCCGATAGGACGATGCCTCATATTGGACTTCTTG--GCCTCCGGCAGCGGATAAAA 14159045
Query 37593 ATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTT 37652
|||||||||||||| ||||| || ||| | | | | || || | | | |||
Sbjct 14159046 GTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCTCCTTTAGCTT 14159105
Query 37653 GTCGAACATAAATACGTTAT---TATTAACAAATTTACTCAACGAAATAGATCCTAGATT 37709
| ||| | || || | | | ||||| | | | | || || | | |||
Sbjct 14159106 TTTGAAGTCATATGTCTTCTCGGGAGTCACAAACATGTTGAGAGCGATGGAGGCCAAATT 14159165
Query 37710 ACATACAGCAACTTCATCTTCGTTACTAA-ATTGTATAATCTCTGTACAGAGATTACTCG 37768
|| || |||| || || || | || | | | ||| || || || ||||| ||
Sbjct 14159166 GCAAACTGCAATCTCGTC-AGGTGAAGAATACTCAACAATTTCCGTGCACAGATTGCTGC 14159224
Query 37769 ATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTA 37828
| |||| || |||| ||| ||| ||| ||| || || | || || | || |
Sbjct 14159225 ACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCA 14159284
Query 37829 TATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAA--ACTTCTTGC 37886
| || || |||| || | ||| | ||| || |||| ||| || ||| |||
Sbjct 14159285 TGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAAGGACT--GTGC 14159342
Query 37887 TTTAAC-GATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAAT 37945
||| || | ||| || | || |||||||| | ||| | ||| | ||| |
Sbjct 14159343 TTTCACAGTTCG-ATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGAGTTTTTCAAACT 14159401
Query 37946 CATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTT 38005
||| ||||| ||||| | || || |||| |||||||||| ||||| || |
Sbjct 14159402 CATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAACGACCAGTCCT 14159461
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
||| || || |||| ||| || | ||| |||| ||| | ||| || |||||
Sbjct 14159462 CATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCATAGAACAAATCGC 14159521
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCA 38124
|| || || ||||| || || |||| |||||||| | ||||| || |||| |||
Sbjct 14159522 GGGCTCGATGCTCTTCCTTGCCAGTATTC-TTCTTAAGGTCCAGAAACTCAAATACATCC 14159580
Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184
| ||||| || || | |||||| | | ||||| || | || |||| |||||||
Sbjct 14159581 GAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCC 14159640
Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244
| ||| | | ||| ||| | | ||| | |||||| || | ||||| ||| ||||
Sbjct 14159641 ACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCATTGGATGTGCCA 14159700
Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTAT 38279
|| | ||| | || | |||||||| || || ||
Sbjct 14159701 TTCGTTCCGCAAATCGAGGTACCCTTTGCACGAAT 14159735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468444278156560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |