Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq13746 185 8e-42 >seq13746 Length=16180835 Score = 185 bits (204), Expect = 8e-42 Identities = 940/1475 (64%), Gaps = 30/1475 (2%) Strand=Plus/Plus Query 36823 TTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATA 36882 ||||| | || || |||||||| ||||| || || | |||| ||| ||||| || Sbjct 14158273 TTTGTGCGCAAGTAGTACATTCCGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATG 14158332 Query 36883 CTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATATTGTCATTGATTGACTTTGAT 36940 || || ||| | || | || | | | || |||||| | || || || |||| Sbjct 14158333 GATGTGAGCTTTCCATAGTTTGGCTCTGCCACATGGATATTG--AAGGACTGGCTCTGAT 14158390 Query 36941 CTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAA 37000 ||||||||||||| | || || ||||||| | | |||| || || ||||| | Sbjct 14158391 CTATAAACGCACCGCGATCAGCGGCCATTTTAATGGTTGATTTCACTGAGATTTCCCATA 14158450 Query 37001 CCGTTTTATATATTTGTTTTATATTATCTGGTA---AATCTAAATGTTGAATAGAACCAT 37057 | ||||| || | | | || | || | | || | || ||||||||| || Sbjct 14158451 CTGTTTTGTAAAGGTCGCGAACCTTTTGGGGAATGGATTCAATATTTTGAATAGATCCCC 14158510 Query 37058 TATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATT-AGTTCT 37116 | | | || |||||| ||||||| | ||||| || | || | | || Sbjct 14158511 TGCTGGAGATTATCTGATTCTTCATGTCATCGTCCCACAAATC-CAGCTCCGTCAAGTCC 14158569 Query 37117 CTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATA 37176 |||| | || | || || || || || || || || | ||| | ||| ||||| ||| Sbjct 14158570 CTCAGCAAATGATGGTTAACCACTTGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATA 14158629 Query 37177 TTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTA 37236 || | || || || || | |||||| || |||| | || |||| || ||||| || Sbjct 14158630 TTTGTTGTGTAGGGCTCGAAGGACTCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTG 14158689 Query 37237 GGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG-TGTATTAATTCTCTTTTTTAG 37295 ||||| || || | | ||| ||||| | |||||| ||| || || || || || Sbjct 14158690 GGCATCGGAGCAACCAATAGGGAGTTTCTGACTCCATGCTGT-TTGATAGACTCCTTCAG 14158748 Query 37296 TTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACC 37355 ||||| ||||| | | | || || | || |||||| || || || ||||| || Sbjct 14158749 AGATTTCCAGTCCCAGAGACCAGTCGGCGTTTTATCCCACATGTCGTACTGCAGAATTCC 14158808 Query 37356 TTTACTCGCTGGAGAATCGTT-ATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGC 37414 ||||| |||| | || || ||| || ||||||| ||||| ||| || ||||||| Sbjct 14158809 CTTACTTACTGG-GCTTCCTTCATAAGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGC 14158867 Query 37415 AACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTG 37474 |||| | || || || || | || |||||||| ||||| ||| || || | ||| Sbjct 14158868 AACTGGCCTCCAGGGCTCCAAAGTAGATTGTTTCAAAAATCTGTTGGTTCAAGAGGCTTG 14158927 Query 37475 CTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACAC 37534 | || ||||| ||| | | ||| | || | || | | | ||||||| |||||||||| Sbjct 14158928 CCTCCTCGCTTTCGTAGGGATAACGCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACAC 14158987 Query 37535 CGATACCTATGGGTCTATGTTTCTTATTAGA--TCTAGACGATTCTATCACTGGATAATA 37592 |||| || || || | ||| || |||| || ||| | | || || |||||| | Sbjct 14158988 CGATTCCGATAGGACGATGCCTCATATTGGACTTCTTG--GCCTCCGGCAGCGGATAAAA 14159045 Query 37593 ATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTT 37652 |||||||||||||| ||||| || ||| | | | | || || | | | ||| Sbjct 14159046 GTTGATATCTATTATCTTATTGAGGTTTCTGGCCACCGTCTTTGTGACCTCCTTTAGCTT 14159105 Query 37653 GTCGAACATAAATACGTTAT---TATTAACAAATTTACTCAACGAAATAGATCCTAGATT 37709 | ||| | || || | | | ||||| | | | | || || | | ||| Sbjct 14159106 TTTGAAGTCATATGTCTTCTCGGGAGTCACAAACATGTTGAGAGCGATGGAGGCCAAATT 14159165 Query 37710 ACATACAGCAACTTCATCTTCGTTACTAA-ATTGTATAATCTCTGTACAGAGATTACTCG 37768 || || |||| || || || | || | | | ||| || || || ||||| || Sbjct 14159166 GCAAACTGCAATCTCGTC-AGGTGAAGAATACTCAACAATTTCCGTGCACAGATTGCTGC 14159224 Query 37769 ATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTA 37828 | |||| || |||| ||| ||| ||| ||| || || | || || | || | Sbjct 14159225 ACTTAATGGTGCCCACATTCTGTTGGTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCA 14159284 Query 37829 TATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAA--ACTTCTTGC 37886 | || || |||| || | ||| | ||| || |||| ||| || ||| ||| Sbjct 14159285 TGTAAGGATTTCCAGTCTCCACTTGCGACTCAATGATAGCAAACCACAAGGACT--GTGC 14159342 Query 37887 TTTAAC-GATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAAT 37945 ||| || | ||| || | || |||||||| | ||| | ||| | ||| | Sbjct 14159343 TTTCACAGTTCG-ATTGGCGCGTCCCTCCTGTTCGTATTTCACATAGAGTTTTTCAAACT 14159401 Query 37946 CATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTT 38005 ||| ||||| ||||| | || || |||| |||||||||| ||||| || | Sbjct 14159402 CATCGCCCCACACATCATGGAGGCCAGGGCATTTATGGGGACACATTAACGACCAGTCCT 14159461 Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || || |||| ||| || | ||| |||| ||| | ||| || ||||| Sbjct 14159462 CATTGGCCTCCACTCGTTTCATGAAGAGATCTGGTATCCACAGGGCATAGAACAAATCGC 14159521 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCA 38124 || || || ||||| || || |||| |||||||| | ||||| || |||| ||| Sbjct 14159522 GGGCTCGATGCTCTTCCTTGCCAGTATTC-TTCTTAAGGTCCAGAAACTCAAATACATCC 14159580 Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184 | ||||| || || | |||||| | | ||||| || | || |||| ||||||| Sbjct 14159581 GAATGCCAGGGCTCCAGATAAATGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCC 14159640 Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244 | ||| | | ||| ||| | | ||| | |||||| || | ||||| ||| |||| Sbjct 14159641 ACATACCGCGCCACGTTGTTAAAGACTCTCAGCATAGGAACCAGGCCATTGGATGTGCCA 14159700 Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTAT 38279 || | ||| | || | |||||||| || || || Sbjct 14159701 TTCGTTCCGCAAATCGAGGTACCCTTTGCACGAAT 14159735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468444278156560