Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq13746 452 5e-122 seq13747 132 6e-26 >seq13746 Length=16180835 Score = 452 bits (500), Expect = 5e-122 Identities = 1257/1908 (66%), Gaps = 30/1908 (2%) Strand=Plus/Plus Query 64829 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 64888 |||||| | || || ||||| | || || || || || || | ||||||||||| Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCC 14158295 Query 64889 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 64948 ||||| ||||| |||| ||| ||||| || || || || ||| | || Sbjct 14158296 GGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGG 14158355 Query 64949 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 65008 ||||| | ||||||||| | || || || ||||| || || || || | || || || Sbjct 14158356 CTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGC 14158415 Query 65009 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 65067 |||||| ||| | | || || |||||||| | ||||| |||| |||| || | Sbjct 14158416 CATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACCT 14158474 Query 65068 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTG 65123 || |||| || || |||| ||||| ||||| || ||| || ||| |||||| Sbjct 14158475 TTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTTC 14158533 Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 65183 || ||||| | ||| || | ||| || || | || || | ||| | ||||| ||| Sbjct 14158534 ATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACT 14158593 Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243 || || || || || | ||| | | || |||||||| | || || || || | ||| Sbjct 14158594 TGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGAC 14158653 Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 65303 || || || |||| ||| |||||||| ||||| || ||||| || || ||||||| Sbjct 14158654 TCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAG 14158713 Query 65304 TTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 65362 ||||| | || | |||| |||| || || |||| || ||| | ||| ||| | | Sbjct 14158714 TTTCTGACTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGT 14158772 Query 65363 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 65422 ||| || ||||| || ||||| | |||| |||| Sbjct 14158773 CGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATA 14158832 Query 65423 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 65482 || || || | ||| || || | || ||||| ||||| ||||| | || || | || Sbjct 14158833 AGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTA 14158892 Query 65483 AATGGTTTCGAAGATCTTCTTATTTA-GATCTTGTGCTTCCAGGCTATCAAATGGATAAT 65541 || ||||| || |||| | || | || | ||| ||| ||| || | |||||| Sbjct 14158893 GATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGTAGGGATAAC 14158951 Query 65542 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 65601 | ||||| | |||||| || | ||| |||||||| || |||||||| | ||| ||| Sbjct 14158952 GCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCA 14159011 Query 65602 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 65661 |||| || | | || || || | |||||| | || |||||||| || |||||||| | Sbjct 14159012 TATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGT 14159071 Query 65662 TTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTA-- 65718 ||||| | | ||||| || ||||| || || || ||| || || || Sbjct 14159072 TTCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATATGTCTTCTCGGGA 14159130 Query 65719 -TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 | ||||||||||| | || | || |||| ||| ||||| || | ||| | || Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | ||| | | || || ||||| ||||| || ||||| ||||| || | ||| ||||| Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || |||||| ||| || || ||||| | || ||| | ||| | ||||| || | || Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310 Query 65898 GATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCTTTT 65955 || || || || || ||| | | ||| | || || | | |||| | || | Sbjct 14159311 GACTCAATGATAGCAAACCACAAGGACT-GTGCTTTCACAGTTCGATTGGCGCGTCCCTC 14159369 Query 65956 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 || || ||||| ||| | | ||| ||||| || ||||| |||| | | |||| Sbjct 14159370 CTGTT-CGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAG 14159428 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 | |||| || |||||||| |||||||| || | | ||| |||||||||||| |||| Sbjct 14159429 GGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGA 14159488 Query 66076 GATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 66134 |||| || ||||| || || ||| || ||||| | || || ||| || || || || ||| Sbjct 14159489 GATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTA 14159547 Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCC 66194 ||||| ||||| || || ||| | | | ||| ||||||| || |||| || ||||| Sbjct 14159548 TTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCA 14159607 Query 66195 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 66254 | |||| ||||| ||| || |||||||| | || | || ||| ||| | ||| Sbjct 14159608 AAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACT 14159667 Query 66255 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTT 66314 |||| ||| |||| | ||||||||||| ||||| || ||| | || || | || || Sbjct 14159668 CTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTT 14159727 Query 66315 GCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370 |||||||| ||| || ||||| || || || || || ||||| | || Sbjct 14159728 GCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGC 14159783 Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 |||| | | | || | |||| ||||| || || | ||||| | || || || Sbjct 14159784 GCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAA 14159843 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 |||| |||| ||| ||||| | || | || ||| | || || |||||||| || Sbjct 14159844 ACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGT 14159903 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 66550 || | || || || | ||||||||||| | || | || || || | ||| Sbjct 14159904 GAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATG 14159963 Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610 |||||| | ||| || ||||| | |||||| || || | || ||| || ||||| Sbjct 14159964 AATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTTAT 14160023 Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 66670 ||| | | ||| || |||| ||||||||| ||||| || || || |||||| || Sbjct 14160024 TTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCACG 14160083 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 66718 || ||||| ||| ||||| || |||| || ||| || || || Sbjct 14160084 ATCATAAATTATAGATGAGTTAAGGCGATCCGCATTTTTTTTGACCAC 14160131 >seq13747 Length=19884421 Score = 132 bits (146), Expect = 6e-26 Identities = 351/534 (66%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 36161 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 36220 ||||| |||||||| ||||| ||||| || || | |||||||| || || || ||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 36221 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 36280 ||||| | || ||||| || | ||| || || || ||||| || ||||| || Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATA 8706558 Query 36281 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATGTA-TC 36337 || || || || ||||| || || | | ||| ||| | ||| ||| | | | || Sbjct 8706559 CCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATC 8706618 Query 36338 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 36397 || |||||||||| ||||| || || |||||| ||||| || ||||| || Sbjct 8706619 CAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAAC 8706678 Query 36398 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 36457 || || | | | |||| || || ||||| || | | ||| ||||| || Sbjct 8706679 AGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCA 8706738 Query 36458 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 36517 || || | |||||| ||||| ||||| || ||||||||||| | ||||| || | ||| Sbjct 8706739 GAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGA 8706798 Query 36518 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 36577 || || || || || || | | || || ||||| ||||| || || ||||| Sbjct 8706799 ACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAG 8706858 Query 36578 AACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG 36637 || |||| || || || || | ||||| | || || |||||| || Sbjct 8706859 AAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCGGTG 8706918 Query 36638 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 | ||| || || | ||||| || || || ||||| || || || || |||||| Sbjct 8706919 AGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658059684777160