Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq13746 120 3e-22 >seq13746 Length=16180835 Score = 120 bits (132), Expect = 3e-22 Identities = 195/281 (69%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 || || || ||||| || ||| || || | ||| |||| ||||| || ||||| || Sbjct 795618 AGTGGCTCCACGTGATTTAGGTATACATGCGTGTCTCCCATAGTGTGTACGAAGTCACCA 795677 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || | || || ||||| || ||||||| ||| |||| | ||| ||| ||| ||||| Sbjct 795678 GGCTTTAGACCAGTGACATGGGCGATCATATAGGTCAACAAGGCATAGGAGGCAATGTTG 795737 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC---- 21100 || || || || ||||||||||||||| | || |||||||||||||| || || Sbjct 795738 AAGGGTACACCCAGGCCCATGTCGGCGCTTCGTTGATACAGCTGGCAGGAGAGTTCGCCG 795797 Query 21101 --CCCCCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCG 21158 | || ||| || ||||||||| ||| ||| || ||||| | ||||| | Sbjct 795798 CGCTCCTGAGAGACATAAAACTGAGCCAAGCAGTGGCACGGAGGCAATGCCATTTTTGGA 795857 Query 21159 AGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATC 21199 | |||| || |||||||| |||| | ||| || | ||| Sbjct 795858 ATGTCCAGAGGATTCCACGCCGACATGATGATCCGTCTATC 795898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427704319313520