Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 114 1e-20
seq13746 107 2e-18
seq13748 105 7e-18
>seq13745
Length=6960332
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
|||||| || | ||||||||| || || | || ||||| || || ||||| || |||
Sbjct 840910 GCCGCCGCGCAGACGCAAAACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGA 840969
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| ||| || ||||| || || || |||||||||| |||||||| |||||
Sbjct 840970 CAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGG 841029
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| || || | | || | ||||||| ||||| ||
Sbjct 841030 GATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGATGGCTCGAC 841089
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||||||||| | || || ||||| || |||||
Sbjct 841090 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841137
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | || ||||| || || ||||| || ||| || |||| ||| ||
Sbjct 841157 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCC 841216
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
||||| || || || |||||||||| |||||||| ||||| || || || ||||| |
Sbjct 841217 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 841276
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | || | ||||||| |||||| ||||| | ||| | ||||||
Sbjct 841277 ATCTTAGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTG 841336
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| | || || ||||| || |||||
Sbjct 841337 CCGGTGAGGGTCTTCACGAAGATCTGCAT 841365
>seq13746
Length=16180835
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || ||||| | |||||||| || ||||||||||| || | ||||
Sbjct 14254432 CGCAGCACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGACCA 14254373
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || ||||| |||||||||| |||||||| ||||| || |||||||||
Sbjct 14254372 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 14254313
Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| | || | ||| | | ||| | || || | || || ||||||| || |
Sbjct 14254312 TC-CTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGAT 14254254
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| || | || || ||||| || |||||
Sbjct 14254253 GGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 14254218
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || ||| | |||| || || ||||| || ||
Sbjct 2088063 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCCAGCTGCTTGCCG 2088004
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||||||||| |||||||| ||||| ||||| |||||||| ||| || ||
Sbjct 2088003 GCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCCTCTTTGTCCTGGATCTTAGCCTTC 2087944
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| | ||||| ||||| | ||| | ||||||||||| | |||
Sbjct 2087943 ACATTCTCGATGGTGTCCGACGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTT 2087884
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| ||||||||
Sbjct 2087883 TTCACGAAGATTTGCAT 2087867
>seq13748
Length=23293914
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || ||||||| || ||||| || |||||||| || || |
Sbjct 9537221 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 9537162
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || || || |||||| ||| ||||| || || ||
Sbjct 9537161 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 9537102
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || ||| | | || | ||||||| ||||||||||
Sbjct 9537101 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATGGTGTCGGAGGGCTCCACC 9537042
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | ||| | || || || ||||| ||||| ||||| || |||||| ||
Sbjct 9537041 TCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACGAAGATCTGCATACCT 9536991
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|||||||| | ||| | || ||||| | || ||||| || || || || || || |
Sbjct 9536765 CCGCCTCGCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 9536706
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || || || |||||| ||| ||||| || || ||
Sbjct 9536705 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 9536646
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | || | || || | |||||||||
Sbjct 9536645 ATTCCCTCCTTGTCT-TGAATCTTGGCCTTCACGTTCTCGATGGTATCAGAGGGCTCCAC 9536587
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| | ||| | ||||| |||||||| || |||||||| || ||||||
Sbjct 9536586 CTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTTACGAAGATCTGCATA 9536538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495978745200800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |