Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13746 529 3e-145 seq13747 152 7e-32 >seq13746 Length=16180835 Score = 529 bits (586), Expect = 3e-145 Identities = 1279/1913 (67%), Gaps = 40/1913 (2%) Strand=Plus/Plus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||| | || || ||||| | || || || || || || | ||||||||||| Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCC 14158295 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 ||||| ||||| |||| ||||||||| || || || || ||| | || Sbjct 14158296 GGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGG 14158355 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 ||||| | ||||||||| | || || || ||||| || || || || | || || || Sbjct 14158356 CTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGC 14158415 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 78946 |||||| ||| | | || || |||||||| | ||||| |||| |||| || | Sbjct 14158416 CATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACCT 14158474 Query 78947 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTG 79002 || |||| || || |||| ||||| ||||| || ||| || ||| |||||| Sbjct 14158475 TTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTTC 14158533 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || || || | ||| || | ||| || || | || || | ||| | ||||| ||| Sbjct 14158534 ATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACT 14158593 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || || || || || | ||| | | || |||||||| | || || || || | || Sbjct 14158594 TGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGAC 14158653 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 || || || |||| ||| |||||||| ||||| || ||||| || || ||||||| Sbjct 14158654 TCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAG 14158713 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 ||||| | || | | |||| || || ||||||| ||| ||||| ||| ||| | Sbjct 14158714 TTTCTGACTCCATGCTGTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGTC 14158773 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || || ||| | || || || ||||| || ||||| | |||| || Sbjct 14158774 GGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATAA 14158833 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 |||||||||| ||| || |||| ||| | ||| ||||| ||||| | ||||| | || Sbjct 14158834 GTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTAG 14158893 Query 79363 ATGGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCTAGGCTATCAAATGGATAATT 79421 || ||||| ||||||| | || | || | ||| || ||| || | |||||| Sbjct 14158894 ATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGTAGGGATAACG 14158952 Query 79422 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 | ||||| | |||||| || | ||| |||||||| || |||||||| | ||| ||| | Sbjct 14158953 CATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCAT 14159012 Query 79482 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 79541 ||| || | | || || || | |||||| | || |||||||| || |||||||| || Sbjct 14159013 ATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGTT 14159072 Query 79542 CCTGACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA--- 79597 ||| | | ||||| || |||||||| || || ||| || ||| ||| Sbjct 14159073 TCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATAT-GTCT-TCTCGGG 14159129 Query 79598 --TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655 | ||||||||||| | |||| || |||| ||| ||||| || | ||| | || Sbjct 14159130 AGTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGA 14159189 Query 79656 CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTG 79715 | ||| | | ||||| ||||| || || || ||||||||||| || | ||| ||||| Sbjct 14159190 AGAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTG 14159249 Query 79716 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTG 79775 || |||||| ||| || || ||||| | || ||| | ||| | ||||| || | || Sbjct 14159250 GTTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTG 14159309 Query 79776 AGATTCTATAATCGCTTTCCA-GACGACTCGAGCCTTTA---TT--ATAGACTTGTATCT 79829 || || || || || ||| | |||| | || || | || || | | || || Sbjct 14159310 CGACTCAATGATAGCAAACCACAAGGACT-GTGCTTTCACAGTTCGATTGGCGCGTCCCT 14159368 Query 79830 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 | | |||||||| ||| | | ||| ||||| || ||||| ||||| | | Sbjct 14159369 CCT-----GTTCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAG 14159423 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 ||||| |||| | |||||||| |||||||| || ||| ||| ||||||||||| Sbjct 14159424 GCCAGGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCAT 14159483 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTC 80008 |||||||| || ||||| || || ||| || | ||| | || || |||||| || || | Sbjct 14159484 GAAGAGATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGC 14159542 Query 80009 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 | |||||||| ||||| || || ||| | | | ||| |||||||| || |||| || | Sbjct 14159543 CAGTATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAA 14159602 Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128 |||| | ||||||| || ||| || |||||||| | || | || ||| ||| Sbjct 14159603 TGGCAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAA 14159662 Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188 | ||||||| ||| |||| | ||||||||||| ||||| || ||| | || || | | Sbjct 14159663 AGACTCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTAC 14159722 Query 80189 CACTGGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATT 80244 | | |||||||| ||| || ||||| || || || || || ||||| Sbjct 14159723 CCTTTGCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATC 14159778 Query 80245 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGT 80304 | |||||| | | | || | |||| ||||| ||| || || ||||| | || Sbjct 14159779 ATGGCGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGG 14159838 Query 80305 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364 || |||||| |||| ||| ||||| | || | || ||| | || || |||||| Sbjct 14159839 AGGAAACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCG 14159898 Query 80365 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 80424 || || || | || ||||| | ||||||||||| | || | || || || | Sbjct 14159899 TGAGTGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCT 14159958 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTA 80484 ||||||||| | || || ||||| | |||||| || || | || ||| || | Sbjct 14159959 CCATGAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCA 14160018 Query 80485 TTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 80544 |||||||| | | |||||| |||| ||||||||| ||||| || || || |||| Sbjct 14160019 TTTATTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAG 14160078 Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 80597 || || || ||||| ||| ||||| || |||| || ||| || || || Sbjct 14160079 TCACGATCATAAATTATAGATGAGTTAAGGCGATCCGCATTTTTTTTGACCAC 14160131 >seq13747 Length=19884421 Score = 152 bits (168), Expect = 7e-32 Identities = 358/536 (67%), Gaps = 7/536 (1%) Strand=Plus/Plus Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022 ||||| |||||||||||||| ||||| || || || |||||||| || || || ||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--TGACCCAGAAAAGAAGA 50080 ||||| | || ||||| || | ||| || || || ||||| || | | | ||||| | Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTG--AAGAATA 8706556 Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTC--ATGTA 50137 | || || || || ||||| || | | | ||| ||| | |||| | || | | Sbjct 8706557 TACCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAA 8706616 Query 50138 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 50197 |||| |||||||||| ||||| || || ||||||||| || |||||||| | Sbjct 8706617 TCCAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGA 8706676 Query 50198 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTT 50257 | || || | | | |||| || ||||||||||| | | ||| ||||| | Sbjct 8706677 ACAGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCT 8706736 Query 50258 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 50317 | || || | |||||| ||||| || || || ||||||||||| | ||||| || | || Sbjct 8706737 CAGAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCT 8706796 Query 50318 GCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 50377 | || || || || || || | | || || ||||| ||||| || || |||| Sbjct 8706797 GAACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAA 8706856 Query 50378 AAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCAT 50437 | || |||| || || || || || ||||| | | || || |||||| Sbjct 8706857 AGAAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCGG 8706916 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 ||| ||| || || | || || || || || ||||| || || || || |||||| Sbjct 8706917 TGAGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718145356528360