Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 91.5 1e-13
>seq13745
Length=6960332
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||||||||| | | |||||| |||| || |||||| || | ||||| |||||
Sbjct 841366 GCCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 841425
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| || ||| |||| |||| || |||||||| || |||| ||||| ||||| | ||
Sbjct 841426 CAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGG 841485
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| || || || || |||| | || || | ||| |||||| | ||||||
Sbjct 841486 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGAC 841545
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || || || || || ||||| || || |||||
Sbjct 841546 CTCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841593
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||||||||| | | |||||| |||| || |||||| || | ||||| |||||
Sbjct 842278 GCCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 842337
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| || ||| |||| |||| || || ||||| || |||| ||||| ||||| | ||
Sbjct 842338 CAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 842397
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| || || || || |||| | ||||| | | | |||||| | ||||||
Sbjct 842398 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGGAGGGCTCGAC 842457
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || || || || || ||||| || || |||||
Sbjct 842458 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842505
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| || || | | |||||| |||| || |||||| || | ||||| |||||
Sbjct 842506 GCCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 842565
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|| || ||| |||| |||| || |||||||| || |||| ||||| ||||| | ||
Sbjct 842566 CAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 842625
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| || || || || |||| | || || | | | || ||| | ||||||
Sbjct 842626 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAGGGCTCGAC 842685
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || || || || || || || ||||| ||||||||||| ||
Sbjct 842686 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATCTT 842736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381305695445442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |