Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13746 448 6e-121 seq13747 154 2e-32 >seq13746 Length=16180835 Score = 448 bits (496), Expect = 6e-121 Identities = 1235/1875 (66%), Gaps = 34/1875 (2%) Strand=Plus/Plus Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGC 70849 |||||| | ||||||||||| | || || |||||| || || | |||||||| | Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTT-GTGCGCAAGTAGTACATTC 14158294 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909 | ||||| ||||| |||| ||| ||||| || || || || |||| | | Sbjct 14158295 CGGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTG 14158354 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 | || || | || ||||| | ||||| || ||||| || || || || | || || | Sbjct 14158355 GCTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGG 14158414 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 71028 ||||||| ||| | | || || |||||||| | ||||| |||| |||| || Sbjct 14158415 CCATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACC 14158473 Query 71029 TCTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCA-ATAATCCTATTTTT 71084 | || |||| || || |||| ||||| ||||| || ||| | || ||| ||| || Sbjct 14158474 TTTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTT 14158532 Query 71085 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144 || || || | ||| || | ||| || || | || || | |||| | ||||| || Sbjct 14158533 CATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCAC 14158592 Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204 ||| || || || || | ||| | | || |||||||| | || || || || | || Sbjct 14158593 TTGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGA 14158652 Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACT 71264 ||| || || |||| ||| |||||||| ||||| || ||||| || || |||||||| Sbjct 14158653 CTCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGA 14158712 Query 71265 ATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324 ||||| | ||||| | ||| || || ||||||| ||| | ||| ||| | | Sbjct 14158713 GTTTCTGACTCCATGCTGTTTGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGT 14158772 Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384 || || || ||||| | |||| |||| Sbjct 14158773 CGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATA 14158832 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || || || | ||| ||||||| ||| ||||| ||||| ||||| | |||||| | || Sbjct 14158833 AGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTA 14158892 Query 71445 AATGGTTTCGAAAATCTTCTTATTGA-GATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503 || ||||| ||||||| | || | || | ||| ||| ||| || | |||||| Sbjct 14158893 GATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGTAGGGATAAC 14158951 Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 | ||||| | |||||| || | ||| ||||| || || |||||||| | || ||| Sbjct 14158952 GCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCA 14159011 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| || | | || || || | |||||| | || |||||||| || |||||||| | Sbjct 14159012 TATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGT 14159071 Query 71624 TTCTGACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA-- 71680 ||||| | | ||||| || |||||||| || || ||| || || || Sbjct 14159072 TTCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATATGTCTTCTCGGGA 14159130 Query 71681 -TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739 | ||||||| ||| | || | || |||| ||| ||||| || | ||| | || Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190 Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799 | ||| | | |||||| ||||| ||||| || ||||| ||||| || | ||| ||||| Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250 Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859 || |||||| ||| || || ||||| | || || | ||| | ||||| || | || Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310 Query 71860 GATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTA---TTATATTCTTGTATCTCTT 71915 || || || || || ||| | | ||| | || || | || ||| | || || Sbjct 14159311 GACTCAATGATAGCAAACCACAAGGACT-GTGCTTTCACAGTTCGATTGGCGCGTCCCTC 14159369 Query 71916 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 | | ||||||| ||| | | ||| ||||| || ||||| ||| | | || Sbjct 14159370 CTGT---TCGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCC 14159426 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 ||| |||| || |||||||| || ||||| || ||| | | ||||||||||| || Sbjct 14159427 AGGGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAA 14159486 Query 72036 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094 |||||| || ||||| || || ||| || | ||| | || || |||||| || || || | Sbjct 14159487 GAGATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAG 14159545 Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154 ||||||| ||||| || || ||| | | | ||| |||||||| || |||| || |||| Sbjct 14159546 TATTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGG 14159605 Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214 | | |||||||||| ||| || |||||||| | || | || ||| ||| | | Sbjct 14159606 CAAAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGA 14159665 Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274 |||||| ||| |||| | |||||||||| ||||| || ||| | || || | || Sbjct 14159666 CTCTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCT 14159725 Query 72275 TGGCACGAATATTGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 | ||||||| ||| ||| || ||||| || || || || || ||||| | Sbjct 14159726 TTGCACGAA---TGC-AATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATG 14159781 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 |||||| | | | || | |||| ||||| || || | ||||| | || || Sbjct 14159782 GCGCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGG 14159841 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 |||||| |||| ||| ||||| | || | || ||| | || || |||||||| Sbjct 14159842 AAACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGA 14159901 Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA 72510 || || | || ||||| | ||||||||||| | || | || || || | | Sbjct 14159902 GTGAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCA 14159961 Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570 || ||||| | || || ||||| | ||| || || || | || ||| || |||| Sbjct 14159962 TGAATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTT 14160021 Query 72571 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 72630 ||||| | | ||| || |||| ||||||||| ||||| || || || |||||| Sbjct 14160022 ATTTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCA 14160081 Query 72631 CGTTCGTAAATAATA 72645 || || ||||| ||| Sbjct 14160082 CGATCATAAATTATA 14160096 >seq13747 Length=19884421 Score = 154 bits (170), Expect = 2e-32 Identities = 358/535 (67%), Gaps = 5/535 (1%) Strand=Plus/Plus Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127 ||||| |||||||||||||| || || || || | |||||||| || || || ||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATT 42187 ||||| | || ||||| || | ||| || ||||| ||||| || ||||| || Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATA 8706558 Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATGTA-TC 42244 || || || || ||||| || || | | ||| ||| | ||| ||| | | | || Sbjct 8706559 CCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATC 8706618 Query 42245 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 || |||||||||| ||||| || || ||||||||| || |||||||| || Sbjct 8706619 CAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAAC 8706678 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 || || | | | |||| || || |||||||| | | ||| ||||| || Sbjct 8706679 AGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCA 8706738 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || | |||||| ||||| || || || ||||||||||| | ||||| || ||||| Sbjct 8706739 GAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGA 8706798 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 || || || || || || | | || |||||||| ||||| || || ||||| Sbjct 8706799 ACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAG 8706858 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA-TTTATTCCAATCATT 42543 || |||| || || || || | ||||| || |||| || |||||| | Sbjct 8706859 AAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGT-CGTCCTTAAGGCGATGCCAATCGGT 8706917 Query 42544 GATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 || ||| || || | || || || || || ||||| || || ||||| |||||| Sbjct 8706918 GAGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671023856339240