Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13747 212 9e-50 seq13746 201 2e-46 seq13734 185 1e-41 >seq13747 Length=19884421 Score = 212 bits (234), Expect = 9e-50 Identities = 562/847 (66%), Gaps = 36/847 (4%) Strand=Plus/Minus Query 125036 AAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGA 125095 ||||||| | ||||| || ||||| ||||| ||||| || || || ||||| || ||| Sbjct 8706972 AAAGGCTGAAGCCTCTTTCTGGACTGTCGAGGAGGTGGACCTCTCGAAGGATCTCACCGA 8706913 Query 125096 TTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTT 125155 |||| | ||| | | || || || | || || || ||| | |||||||||| Sbjct 8706912 TTGGCA---TCGCCTTAAGGACGACGAACGCCACTTCATCTCCCACGTGCTGGCCTTCTT 8706856 Query 125156 TGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGAC 125215 ||| | || |||||||| || ||||| || ||| || || ||| ||| ||| | Sbjct 8706855 TGCTGCTTCGGATGGAATTGTGAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTTCA 8706796 Query 125216 CATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGA 125275 | | |||| | || || ||||| ||||||||| || || ||||||||||| || Sbjct 8706795 GGTCACGGAGGCGCGCTGTTTCTACGGTTTCCAAATCGCCATGGAAAACGTGCACTCTGA 8706736 Query 125276 AATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAAC---GTAAACACATGCT 125332 |||||| | || || || | |||||||| ||||| || | || || || || | Sbjct 8706735 GATGTACAGTGTGCTCATCGATACTTACATTCGAGATCCCCACCAGCGTGAATACCTGTT 8706676 Query 125333 CTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGG-- 125390 | || || || || ||| |||| | || || || ||| || |||| || Sbjct 8706675 C---AATGCCATTGAGACGATGCCTGCG----GTGAA---GCGCAA-GGCAGATTGGGCT 8706627 Query 125391 -TGGA-TCGATGACGAC-AAGTCTTCGTAC---GCCGACAGACTGGTGGCATTCGCCGCC 125444 ||| | ||| | | ||||| | || | || | | | ||||| || ||| Sbjct 8706626 CTGGCCTGGATTTCTTCGAAGTCAGCCAACTTTGGGGAGCGCATCATCGCATTTGCTGCC 8706567 Query 125445 GTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGA 125504 || ||||| || ||||| || || ||||| | ||||| ||| | |||||||| || Sbjct 8706566 GTGGAGGGTATATTCTTCAGCGGCAGCTTTGCCTCTATCTTCTGGTTGAAGAAGCGAGGT 8706507 Query 125505 CTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGT 125564 | |||||||| ||||| | |||||| |||| || | ||||| || || ||||| Sbjct 8706506 TTGATGCCCGGTCTGACCTTCTCCAACGAGCTTATCTCCAGGGACGAAGGTCTGCACTGC 8706447 Query 125565 GACTTTGCCATTCTACTGTTTC-GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGA 125623 ||||| || | || |||| | ||| || ||||| || || || |||| Sbjct 8706446 GACTTCGCTGTGCTTATGTTCCAGCACCT-----CGTCCAGAAACCACGTC--GCGAGCG 8706394 Query 125624 AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATC 125683 | ||||| | ||| | |||||| ||| || || || ||||| || ||||| | Sbjct 8706393 CA---TCATCGAGATTATCCGCGATGCTGTGGACATTGAGCAGGAGTTCCTCACCGACGC 8706337 Query 125684 CCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGT 125743 | | || || | |||| |||||||||||| | | |||| | ||||| || ||||| Sbjct 8706336 CTTGCCCGTGAATTTGATCGGCATGAACTGCGACTTGATGTCGCAATACATCGAATTTGT 8706277 Query 125744 GGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTT 125803 ||| || || |||||| ||| || | |||| || |||||| |||| || || || Sbjct 8706276 GGCGGACCGGCTACTGGTAGAGCTGGGCGTAGGCAAAATCTACAACACCAAAAACCCTTT 8706217 Query 125804 TGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAG 125863 |||||||| | || || || || || ||||||||||| || || |||||||| | Sbjct 8706216 CAATTTCATGGAGATGATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAGAAGGTGGG 8706157 Query 125864 CGAGTAC 125870 |||||| Sbjct 8706156 AGAGTAC 8706150 >seq13746 Length=16180835 Score = 201 bits (222), Expect = 2e-46 Identities = 316/451 (70%), Gaps = 6/451 (1%) Strand=Plus/Minus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 |||| || |||||||| ||||| ||| |||||| ||| || | ||| ||| || Sbjct 796026 TGGGCCCGGTGTACGGTTTCCAATGGCGGCACTTTGGCGCCGAATATACTACCTGTGACG 795967 Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193 ||||| || ||||| | |||||| | || |||||||||| | |||| | Sbjct 795966 ATGACTACCGTGGAAAGGGTATCGATCAACTAAAGCATGTCATTGACACGATAAAGAAGA 795907 Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 |||| | ||||| ||||| | |||| | ||||||||| || | | |||||| Sbjct 795906 ATCCTTCGGATAGACGGATCATCATGTCGGCGTGGAATCCTCTGGACATTCCAAAAATGG 795847 Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTA---CTCGTACGAT---GGCAAATTGT 70307 || | || ||||| ||||| |||||||||||||| ||| | || ||| || | | Sbjct 795846 CATTGCCTCCGTGCCACTGCTTGGCTCAGTTTTATGTCTCTCAGGAGCGCGGCGAACTCT 795787 Query 70308 CATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAA 70367 | ||| ||||||| | || |||||||||||||| ||||||||||| |||||||| Sbjct 795786 CCTGCCAGCTGTATCAACGAAGCGCCGACATGGGCCTGGGTGTACCCTTCAACATTGCCT 795727 Query 70368 GCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCG 70427 |||| | ||||||| | ||||| || || | || || || || | || |||| Sbjct 795726 CCTATGCCTTGTTGACCTATATGATCGCCCATGTCACTGGTCTAAAGCCTGGTGACTTCG 795667 Query 70428 TACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAAC 70487 ||||||| || || ||| | || || || |||||||| | |||||| | ||| ||||| Sbjct 795666 TACACACTATGGGAGACACGCATGTATACCTAAATCACGTGGAGCCACTTCAGGAGCAAC 795607 Query 70488 TCGAACGGGAGCCGAGACCTTTTCCCAAGCT 70518 | ||||| |||||| | || || ||||| || Sbjct 795606 TTGAACGCGAGCCGCGGCCCTTCCCCAAACT 795576 Score = 149 bits (164), Expect = 9e-31 Identities = 384/579 (66%), Gaps = 12/579 (2%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGT--CA 96863 ||| || |||| ||| |||||| || || ||||| ||| | | || ||| || | Sbjct 14159706 AACGAATGGCACATCCAATGGCCTGGTTCCTATGCTGAGAGTCTTTAA--CAACGTGGCG 14159649 Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || || || ||||| || || ||||| || || | ||| | || |||| || Sbjct 14159648 CGGTATGTGGATCAGGGTGGTGGCAAGCGGCCGGGAGCCTTTGCCATTTATCTGGAGCCC 14159589 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 ||||| |||| || ||||| ||| | || | || || ||||| |||||| Sbjct 14159588 TGGCATTCGGATGTATTTGAGTTTCTGGACCTTAAGAAGAATACTGGCAAGGAAGAGCAT 14159529 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 |||||| | || ||||| ||||| || ||| | |||||| | |||||||| || || | Sbjct 14159528 CGAGCCCGCGATTTGTTCTATGCCCTGTGGATACCAGATCTCTTCATGAAACGAGTGGAG 14159469 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 | | || ||||| ||||||| ||| | | || || || ||| ||| Sbjct 14159468 GCCAATGAGGACTGGTCGTTAATGTGTCCCCATAAATGCCCTGGCCTCCATGATGTGTGG 14159409 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 ||||| |||||||| || | ||||| || ||||| || || | ||| Sbjct 14159408 GGCGATGAGTTTGAAAAACTCTATGTGAAATACGAACAGGAGGGACG---CGCCAATCGA 14159352 Query 97164 ---GTCGATGCACGAGAACT-GTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219 || | |||| || || |||| || ||| | | | || || |||||||||| Sbjct 14159351 ACTGTGAAAGCAC-AGTCCTTGTGGTTTGCTATCATTGAGTCGCAAGTGGAGACTGGAAA 14159293 Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279 ||| ||||| || | |||||| || || || || |||||||||| | ||||||| Sbjct 14159292 TCCTTACATGCTGTTCAAGGACGCCTGCAACCGAAAGAGCAACCAACAGAATGTGGGCAC 14159233 Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339 ||| ||| || ||||||||||||||||||||| ||||| | || || ||||||| || Sbjct 14159232 CATTAAGTGCAGCAATCTGTGCACGGAAATTGTTGAGTATTCTTCACCTGACGAGATTGC 14159173 Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGT 97378 ||||||| | |||| || || ||| || |||||| Sbjct 14159172 AGTTTGCAATTTGGCCTCCATCGCTCTCAACATGTTTGT 14159134 >seq13734 Length=3277472 Score = 185 bits (204), Expect = 1e-41 Identities = 384/570 (67%), Gaps = 14/570 (2%) Strand=Plus/Plus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||| | |||||||||||||| || ||||| | || |||||||| || || || ||| Sbjct 110946 TTGCGGAAGAAGATGACTCCGGCCCGGGGACCGCGCAGCGTCTTGTGGGTCGTCGTCGTC 111005 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221 ||||| || ||| || ||||| || || | | | || | | ||||| | Sbjct 111006 ACAATATCGGCATATTCGAAGGGCGATGGGATCAGTCCAGCGGCCACTATTCCCGCCACA 111065 Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281 || || |||||||||||||| | | || | | ||| ||||| ||||| || | Sbjct 111066 TGGGCCATATCGGCCATCAGGTAAGCACCCACATCGTCGCAAATCTGCCGGAAACGGGCA 111125 Query 127282 TAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGA 127341 ||||||| ||| | ||||| | |||| || ||||| | | || ||| Sbjct 111126 TAGTCCAGCAGCCTGGAGTAGCACGAGATGCCAGCGATGATGATCTGCGGACGGAAGGTC 111185 Query 127342 TTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTAC 127401 ||||| |||||| ||||| |||| |||| || ||| |||| |||| ||||||||| Sbjct 111186 TTGGCCGCCTCGGCCAGTTTATCATAATCGATGATTCCCGTCTCCGGATTCACCTTGTAG 111245 Query 127402 GGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTT--------GCG----GAATCCG 127449 |||||||| ||||| |||| || || ||||| | || ||| ||| || Sbjct 111246 GGCATGCTCTCGAAGAAGATCGACGTGGCGGAGATCTTCTTGGTGGGCGTGAAGAAGCCA 111305 Query 127450 TGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACG 127509 || |||| ||| || || ||||||||||| | |||||||| | | | || || | | Sbjct 111306 TGGGTCAAGTGACCACCATCGGGCAGATCCAAACCCATGATGCGATCATGAGGACGACAG 111365 Query 127510 ATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCC 127569 | || || || || || | |||||| || || ||||| || || ||| || ||| Sbjct 111366 ACACCCGTATAGACAGCCAGATTGGCCGGAGAACCGGAGTAGGGCTGGACATTGACGCCC 111425 Query 127570 CATTCGGACTCGTTCAAATTGAA-CGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGAT 127628 || | | |||| || ||||| | || | || || | ||| || | |||||||| Sbjct 111426 CACTTGTCCTCGGGCAGGTTGAAGAGTTCACGGCCA-CGTTTCTGGGCCAAGAGTTCGAT 111484 Query 127629 GCGATCGATAAACTCGTTACCACCATAGTA 127658 || ||||| |||||||| || |||||||| Sbjct 111485 GCAGTCGATGAACTCGTTGCCGCCATAGTA 111514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740931839713240