Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq13748 96.9 3e-15 >seq13748 Length=23293914 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 || |||||||| ||||| | ||| || | | || ||||||||||||| | | | Sbjct 5397262 GATGTTGCCCAAGTCGCCCAAGTGACGGTTCTCATCGCCGGGAGCGCCGTGCTCCTTGC- 5397320 Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||||||| || || || ||||| |||| ||||||||||| || |||| |||||||||| Sbjct 5397321 CGTAGGGGTTGAAATGGGGGCCGGAGGACATGCAGCCGTTGGTGTTGTCTCCGAACTCGT 5397380 Query 21257 GAACGTGAAAGCCGTGCAGTCC 21278 | || || ||||||||||| || Sbjct 5397381 GCACATGGAAGCCGTGCAGACC 5397402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414503331720106