Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq13746 104 2e-17 >seq13746 Length=16180835 Score = 104 bits (114), Expect = 2e-17 Identities = 192/280 (69%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 ||||| ||||| || | |||||| || | |||||| || ||||||||||| || Sbjct 12134413 ATGCGCTCGCAGATAAACTGAGCAATGCGGTCTCCGCGTTTCACCTCAAAGTCCACGT-- 12134356 Query 5375 CCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAG 5432 | ||| |||||| || || || |||| || || ||||| ||||| || | || || | Sbjct 12134355 CGGAATGGTTAAATAGAACGACGCCGAGGTTACCACGGTAATCTTCATCTACCACTCCGG 12134296 Query 5433 CGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGC 5492 | ||||||||||| |||| || ||||| | || || || || || | ||||||||| Sbjct 12134295 CACCCACGTCGATGAAGTTCTTAACCGCCAAACCAGACCGCGGAGCCACTCGTCCGTAGG 12134236 Query 5493 AACCAGGTGGGAGCTTTATCAGAAGGTCAGTAAACACTACGCAACTGCAATGCGAAGGGA 5552 |||| ||||| || | | |||||||| || | | ||| | | | ||||| Sbjct 12134235 AACCCTCTGGGACCTGGACTTGTAGGTCAGTTTTGACGATGGCCTTGCCACGGGCAGGGA 12134176 Query 5553 CGACACAGTCGTACGCGCTACATAGGTCTAATCCTGCGGC 5592 | || ||||||| || || | || || | ||||| || Sbjct 12134175 CAACTAAGTCGTAAGCACTGCGAAGATCCACACCTGCAGC 12134136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447673448496880