Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq13746 123 2e-23
>seq13746
Length=16180835
Score = 123 bits (136), Expect = 2e-23
Identities = 204/290 (70%), Gaps = 6/290 (2%)
Strand=Plus/Minus
Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560
||||| ||||| || ||||| ||| | || | || ||||| || || | |||
Sbjct 12134491 ACGCCGGTGGAGCCAAATCCTCCTTCTCCACGCTCGGTATCCTCTAGCTTATCGACCAGC 12134432
Query 5561 TCCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCC-CGTCTT 5619
|||| || || | | |||||||||||| | ||| || || ||||| || ||| ||
Sbjct 12134431 TCCAACTCTGGATAGAAAATGCGCTCGCAGATAAACTGAGCAATGCGGTCTCCGCGT-TT 12134373
Query 5620 TACCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAG 5677
||||| || || || | ||| ||| || || || ||||| | ||| || |||||
Sbjct 12134372 CACCTCAAAGTCCACGTCG--GAATGGTTAAATAGAACGACGCCGAGGTTACCACGGTAA 12134315
Query 5678 TCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGG 5737
|| | |||| ||| || || |||||||||||||||| ||| ||||||| || || ||
Sbjct 12134314 TCTTCATCTACCACTCCGGCACCCACGTCGATGAAGTTCTTAACCGCCAAACCAGACCGC 12134255
Query 5738 GGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787
|||||||| || |||||| | || || || | ||| | || ||||| ||
Sbjct 12134254 GGAGCCACTCGTCCGTAGGAACCCTCTGGGACCTGGACTTGTAGGTCAGT 12134205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429982337531288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |