Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30]
13,749 sequences; 230,993,012 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq13745 98.7 8e-16
seq13748 89.7 4e-13
seq13746 89.7 4e-13
>seq13745
Length=6960332
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| ||||||| | || || ||||| | ||| |||||| || |||||||| || | |
Sbjct 840911 CCGCCGCGCAGACGCAAAACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 840970
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 840971 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 841030
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | ||||| |||| | ||| |
Sbjct 841031 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCGGATGGCTCGACC 841090
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || |||||||| || ||||| || ||||||||
Sbjct 841091 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 841137
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | | ||| || || || || |||||| || |||||||| || | |
Sbjct 842507 CCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 842566
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 842567 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 842626
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | |||||||||| | ||| |
Sbjct 842627 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTATCGGAGGGCTCGACC 842686
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
|| | || ||||| || || || || || ||||| ||||| |||||| || ||
Sbjct 842687 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATCTTGGCT 842740
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || |||||||| || | || || |||||||||||||||| ||| || |
Sbjct 841174 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 841233
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | |||||||||||| || | | ||||||||| || || ||| | |
Sbjct 841234 GATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 841293
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| | ||||| |||| | ||| ||| | || ||||| || |||||||| || |||||
Sbjct 841294 CTCAATGGTGTCGGAGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 841353
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 841354 GAAGATCTGCAT 841365
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | | ||| | ||| || || |||||| || |||||||| || | |
Sbjct 841823 CCTCCGCGGAGGCGGAGCACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841882
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 841883 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 841942
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | ||||| |||| | ||| |
Sbjct 841943 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACC 842002
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || |||||||| || || || || ||||| || ||||||||
Sbjct 842003 TCCAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842049
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| |||| | | ||| || || || || |||||| || |||||||| || | |
Sbjct 842279 CCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 842338
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 842339 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 842398
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||||| | | | ||||| |||| | ||| |
Sbjct 842399 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGGAGGGCTCGACC 842458
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || || || || || ||||| || ||||||||
Sbjct 842459 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842505
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| |||| | | ||| || || || || |||||| || |||||||| || | |
Sbjct 841367 CCTCCACGCAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841426
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 841427 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 841486
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | ||||| |||| | ||| |
Sbjct 841487 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACC 841546
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || || || || || ||||| || ||||||||
Sbjct 841547 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841593
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | | ||| || || || || |||||| || |||||||| || | |
Sbjct 841595 CCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 841654
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 841655 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 841714
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | ||||| |||| | ||| |
Sbjct 841715 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACC 841774
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || || || || || ||||| || ||||||||
Sbjct 841775 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 841821
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | | ||| || || || || |||||| || |||||||| || | |
Sbjct 842051 CCTCCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 842110
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| ||| || | || | |||||||||||| ||
Sbjct 842111 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 842170
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | ||||||||| || || ||| | | | | ||||| |||| | ||| |
Sbjct 842171 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGAGGGCTCGACC 842230
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || || || || || ||||| || ||||||||
Sbjct 842231 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 842277
>seq13748
Length=23293914
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || ||||| ||| |||||| ||||||||||| || | || || | |||||
Sbjct 9537203 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 9537144
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
|||||||| ||| || | || ||||||||||| || || | | |||||||||
Sbjct 9537143 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 9537084
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || |||| | | ||||| |||| | |||| ||| | || ||||||||
Sbjct 9537083 ATCTTGGCTTTGACGTTCTCAATGGTGTCGGAGGGCTCCACCTCCAGGGTGATGGTTTTT 9537024
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || | |||||||| || ||||||||
Sbjct 9537023 CCAGTCAAGGTTTTCACGAAGATCTGCAT 9536995
>seq13746
Length=16180835
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/233 (69%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| ||||||| | | ||| | ||| || || |||||| || |||||||| || |
Sbjct 2088094 ACCACCGCGCAGACGGAGCACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 2088035
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || || | |||||||||||||| ||| || | || | |||||||||||| |
Sbjct 2088034 -AAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAG 2087976
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | || |||||| || || ||| | | | | ||||| || | | |||
Sbjct 2087975 GGATGCCCTCTTTGTCCTGGATCTTAGCCTTCACATTCTCGATGGTGTCCGACGGCTCGA 2087916
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||| || |||||||| |||||||| || || ||||| |||
Sbjct 2087915 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATGGTG 2087863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421180612647749
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