Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq13747 84.2 2e-11 >seq13747 Length=19884421 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 || || || || |||| |||||| ||||| || | || || || || || | |||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAA--TGCTCCTGAAAAGAAAA 21596 ||||| || |||| ||| || ||||| || || || ||||| ||| ||||| ||| | Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAA--GAATA 8706556 Query 21597 TGCCCTCAACGGCAGCAAATGC 21618 | ||||| |||||||||||||| Sbjct 8706557 TACCCTCCACGGCAGCAAATGC 8706578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531809386198760