Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20ananassae_20[refseq_20GCF_5F000005115.1_202006-06-30] 13,749 sequences; 230,993,012 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq13746 437 1e-117 seq13747 154 2e-32 >seq13746 Length=16180835 Score = 437 bits (484), Expect = 1e-117 Identities = 1252/1905 (66%), Gaps = 30/1905 (2%) Strand=Plus/Plus Query 61985 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 62044 |||||| | || || ||||| | || || || || || || | ||||||||||| Sbjct 14158236 CTTGTCGACGGTAAACTGAATAGCGTTGGCAGCTGGCTTTGTGCGCAAGTAGTACATTCC 14158295 Query 62045 CGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGG 62104 ||||| ||||| |||| ||| ||||| || || || || ||| | || Sbjct 14158296 GGTTTTAAGACCAGCTTTCCAGGAGTAGAAATGAATGGATGTGAGCTTTCCATAGTTTGG 14158355 Query 62105 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 62164 ||||| | ||||||||| | || || || ||||| || || || || | || || || Sbjct 14158356 CTCTGCCACATGGATATTGAAGGACTGGCTCTGATCTATAAACGCACCGCGATCAGCGGC 14158415 Query 62165 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 62223 |||||| ||| | | || || |||||||| | ||||| |||| |||| || | Sbjct 14158416 CATTTTAATGGTTGATTTCACTGAGATTTCCCATACTGTTTTGTAAAGGTCGCG-AACCT 14158474 Query 62224 CTTCTGGAA-GGTTTG--TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTG 62279 || |||| || || |||| ||||| ||||| || ||| || ||| |||||| Sbjct 14158475 TTTGGGGAATGGATTCAATATTTTGAATAGATCC-CCTGCTGGAGATTATCTGATTCTTC 14158533 Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339 || ||||| | ||| || | ||| || || | || || | ||| | ||||| ||| Sbjct 14158534 ATGTCATCGTCCCACAAATCCAGCTCCGTCAAGTCCCTCAGCAAATGATGGTTAACCACT 14158593 Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399 || || || || || | ||| | | || |||||||| | || || || || | ||| Sbjct 14158594 TGGAACTCCCCGGAGAGTACGCGTCTGGTATAAATATTTGTTGTGTAGGGCTCGAAGGAC 14158653 Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459 || || || |||| ||| |||||||| ||||| || ||||| || || ||||||| Sbjct 14158654 TCGTTGTTACCCATAATCTGAGCAGTCGATGCTGTGGGCATCGGAGCAACCAATAGGGAG 14158713 Query 62460 TTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 62518 ||||| | || | |||| |||| || || |||| || ||| | ||| ||| | | Sbjct 14158714 TTTCTGACTCCATGCTGTT-TGATAGACTCCTTCAGAGATTTCCAGTCCCAGAGACCAGT 14158772 Query 62519 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 62578 ||| || ||||| || ||||| | |||| |||| Sbjct 14158773 CGGCGTTTTATCCCACATGTCGTACTGCAGAATTCCCTTACTTACTGGGCTTCCTTCATA 14158832 Query 62579 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 62638 || || || | ||| || || | || ||||| ||||| ||||| | || || | || Sbjct 14158833 AGTTTCATAAGTTCCGTCTTTTTGGGCCAGTTCGCAACTGGCCTCCAGGGCTCCAAAGTA 14158892 Query 62639 AATGGTTTCGAAGATCTTCTTATTTA-GATCTTGTGCTTCCAGGCTATCAAATGGATAAT 62697 || ||||| || |||| | || | || | ||| ||| ||| || | |||||| Sbjct 14158893 GATTGTTTCAAAAATCTGTTGGTTCAAGAGGCT-TGCCTCCTCGCTTTCGTAGGGATAAC 14158951 Query 62698 TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62757 | ||||| | |||||| || | ||| |||||||| || |||||||| | ||| ||| Sbjct 14158952 GCATAAGAATCAGCGCGTCAGCCAGTCCCTGAACACCGATTCCGATAGGACGATGCCTCA 14159011 Query 62758 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62817 |||| || | | || || || | |||||| | || |||||||| || |||||||| | Sbjct 14159012 TATTGGACTTCTTGGCCTCCGGCAGCGGATAAAAGTTGATATCTATTATCTTATTGAGGT 14159071 Query 62818 TTCTGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA-- 62874 ||||| | | ||||| || ||||| || || || ||| || | || Sbjct 14159072 TTCTGGCCACCGTCTTTGTG-ACCTCCTTTAGCTTTTTGAAGTCATATGTCTTCTCGGGA 14159130 Query 62875 -TTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62933 | ||||||||||| | || | || |||| ||| ||||| || | ||| | || Sbjct 14159131 GTCACAAACATGTTGAGAGCGATGGAGGCCAAATTGCAAACTGCAATCTCGTCAGGTGAA 14159190 Query 62934 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 62993 | ||| | | || || ||||| ||||| || ||||| || || || | ||| ||||| Sbjct 14159191 GAATACTCAACAATTTCCGTGCACAGATTGCTGCACTTAATGGTGCCCACATTCTGTTGG 14159250 Query 62994 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 || |||||| ||| || || ||||| | || ||| | ||| | ||||| || | || Sbjct 14159251 TTGCTCTTTCGGTTGCAGGCGTCCTTGAACAGCATGTAAGGATTTCCAGTCTCCACTTGC 14159310 Query 63054 GATTCTATAATCGCTTTCCAGACG-ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTT 63111 || || || || || ||| | | ||| | || || | | |||| | ||| | Sbjct 14159311 GACTCAATGATAGCAAACCACAAGGACT-GTGCTTTCACAGTTCGATTGGCGCGTCCCTC 14159369 Query 63112 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 63171 || || ||||| ||| | | ||| ||||| || ||||| |||| | | |||| Sbjct 14159370 CTGTT-CGTATTTCACATAGAGTTTTTCAAACTCATCGCCCCACACATCATGGAGGCCAG 14159428 Query 63172 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63231 | |||| || |||||||| |||||||| || | | ||| |||||||||||| |||| Sbjct 14159429 GGCATTTATGGGGACACATTAACGACCAGTCCTCATTGGCCTCCACTCGTTTCATGAAGA 14159488 Query 63232 GATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 |||| || ||||| || || ||| || | ||| | || || ||| || || || || ||| Sbjct 14159489 GATCTGGTATCCACAGGGC-ATAGAACAAATCGCGGGCTCGATGCTCTTCCTTGCCAGTA 14159547 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350 ||||| ||||| || || ||| | | | ||| |||||||| || |||| || ||||| Sbjct 14159548 TTCTTCTTAAGGTCCAGAAACTCAAATACATCCGAATGCCAGGGCTCCAGATAAATGGCA 14159607 Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410 | |||| ||||| ||| || |||||||| | || | || ||| ||| | ||| Sbjct 14159608 AAGGCTCCCGGCCGCTTGCCACCACCCTGATCCACATACCGCGCCACGTTGTTAAAGACT 14159667 Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470 |||| ||| |||| | || || ||| | ||||| || ||| | || || | || | Sbjct 14159668 CTCAGCATAGGAACCAGGCCATTGGATGTGCCATTCGTTCCGCAAATCGAGGTACCCTTT 14159727 Query 63471 GCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526 |||||||| ||| || ||||| || || || || || ||||| | || Sbjct 14159728 GCACGAAT----GCAATGGACGTTAAGACCAATACCACCAGCAGACTTGGAGATCATGGC 14159783 Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 |||| | | | || | |||||||||| ||| || | ||||| | || || || Sbjct 14159784 GCATTGCTCAACCGATTTGAAGATACCCTCGATGGAGTCGGCAGTCATGGTCAGGAGGAA 14159843 Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646 |||| |||| ||| ||||| | || | || ||| | || || |||||||| || Sbjct 14159844 ACAGGACGACAGCTGGGGACGATTCGTGGCAGCGGCAAAAAGTGTTGGCGAAGCGTGAGT 14159903 Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63706 || | || || || | ||||||||||| | || | || || || | ||| Sbjct 14159904 GAAATAACGCTCGGACAGCAAGTTGTACGTCTCCACGGCAGCATCGATGTCTTCTCCATG 14159963 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 |||||| | ||| || ||||| | |||||| || || | || ||| || ||||| Sbjct 14159964 AATTCCGATTGCCACGCGCATAAGCATGTGTTGGGGCCGCTCGGCGACTTTTCCATTTAT 14160023 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63826 ||| | | ||| || |||| ||||||||| ||||| || || || |||||| || Sbjct 14160024 TTTAAGGAGGTAAGAACGCTCCAGAGTTTTAAACCCAAAGTAATTATAACCAAAGTCACG 14160083 Query 63827 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 63871 || ||||| ||| ||||| || |||| || ||| || || Sbjct 14160084 ATCATAAATTATAGATGAGTTAAGGCGATCCGCATTTTTTTTGAC 14160128 >seq13747 Length=19884421 Score = 154 bits (170), Expect = 2e-32 Identities = 356/534 (67%), Gaps = 3/534 (1%) Strand=Plus/Plus Query 33307 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 33366 ||||| |||||||||||||| ||||| || || || |||||||| || || || ||| Sbjct 8706439 GCGAAGTCGCAGTGCAGACCTTCGTCCCTGGAGATAAGCTCGTTGGAGAAGGTCAGACCG 8706498 Query 33367 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATT 33426 ||||| | || ||||| || | ||| || || || || || || ||||| || Sbjct 8706499 GGCATCAAACCTCGCTTCTTCAACCAGAAGATAGAGGCAAAGCTGCCGCTGAAGAATATA 8706558 Query 33427 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-TC 33483 || || || |||||||| || || | | ||| ||| | ||| || | | | || Sbjct 8706559 CCCTCCACGGCAGCAAATGCGATGATGCGCTCCCCAAAGTTGGCTGACTTCGAAGAAATC 8706618 Query 33484 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33543 || |||||||||| ||||| || || ||||||||| || |||||||| || Sbjct 8706619 CAGGCCAGAGCCCAATCTGCCTTGCGCTTCACCGCAGGCATCGTCTCAATGGCATTGAAC 8706678 Query 33544 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33603 || || | | | |||| || ||||||||||| | | ||| ||||| || Sbjct 8706679 AGGTATTCACGCTGGTGGGGATCTCGAATGTAAGTATCGATGAGCACACTGTACATCTCA 8706738 Query 33604 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 33663 || || | |||||| ||||| || || || ||||||||||| | ||||| || | ||| Sbjct 8706739 GAGTGCACGTTTTCCATGGCGATTTGGAAACCGTAGAAACAGCGCGCCTCCGTGACCTGA 8706798 Query 33664 ACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33723 || || || || || ||| ||| || || ||||| ||||| || || ||||| Sbjct 8706799 ACCTCCTGACTGAAGCGCTCCACCAGGTTCTCGTTCACAATTCCATCCGAAGCAGCAAAG 8706858 Query 33724 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 33783 || |||| || || || || | |||||| | || || |||||| || Sbjct 8706859 AAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGTCGTCCTTAAGGCGATGCCAATCGGTG 8706918 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837 | ||| || || | || || || || || ||||| || || || || |||||| Sbjct 8706919 AGATCCTTCGAGAGGTCCACCTCCTCGACAGTCCAGAAAGAGGCTTCAGCCTTT 8706972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622840138736840